Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03577 ATGGAGGAACAAACCGCACAAAAATCACGCCGAGAGCGAAGGAAAGAATCCCGCTTGGCGAAAAATGCATCGAAACACCAATCCTGGCTCCACCACCAGAAATCTCGAGCTATGAAAAGTAGTAACCATAATTCAGAGTTAAAAGCTAAAAACGAATTGGACCAATCAGTTAGTCCTAGTCTCAATGAAACACAAGTTGTGAAGTTGGAATATGTATCTGGGAAACATGAGACAGCTGAAGAGAGCACTGTATCAGGGAAAATTCATGGCTCTGTTGCAAAGAAAATGAGCAAAGGTTCTCTCAAAAGTTCTAAGAAGAAGAGGGCGGAGATAGGTGTGAGTGTGACTGAGCTTTCCATAGCTGCCATGAAGGATCTAGAATTGGAAAGGAAACTTTCCAAGAAGCTCAAGGTGAAGGAAGGAAAATTAAGGGGATTGGATGATGGGCTGAATGTGTTACTAGAAGGAATGTCATCTGCTACCGATTTAATTGAAGAAGGGGAGGTTCCTGGAACTGGTGGATTGCCGGAAAAGAGGTTGAAGAAGGGCTCGTCACATAAGAAGCAGAAGTTGTCATGGGGAGGGATGGAAGGAGAGTCATTAGATGGTGTGTCAGGGCATGTAGAAACTTCTAATCAAGATGTAACATCAGAAGAAGTTACTGACAGTGTACCTTCAAGGAAGAAGCATAAGAAAAGAAAATTTTTGGGTCAAGAGCAGGAAGATAATGTGGAGGATGATGCTGTTTGCATATCAAAGCCTGTGGAATCCAATGGAACGGAGGTAATGTCTGGGGATGTTCCTGCTGAAGTTCCGGTGAAGAGAGCGAAAGAAAAATATATAGCACCTCACTTGAGAGCTCGTGCTGGCAATGAACCTGAAGAGCATACTCAAATTCGAAGACGTGTACGAGGGCTTCTTAACAGGCTTTCTGAATCTAATGTTGAGTCAATAACTGGAGAATTGTCCATGATCTTTCAGTCTGTTCCTCGTAGTGTTGCTTCACAGATTATGATTGAGGAGATTTTAGCATCATGTTCTAGTGGCCCCCGTGGCAATGAACAGTATGCTGCTGTATTTGCTGCATTTGTTGCAGGGATGGCCTGTTTGGTTGGTATTGACTTCAGTGCGAAGTTTATGGCATCTTTTGCCAAATGTTTTGAGGATGAGTACCAGAAAGAAGACAATCTCTCCTTGCGAAATCTTACTCTTCTCTTTTCCTATTTATTCATATTTGGAGTCTGTTCTAGTGATTTAATATATGACTTTCTAGTCATGTTGAGCAAGCGTTTGACTGAAGCAGATGTGTCTATCATTTTGGCAGTGTTACAATGTTGTGGGATGAAAATAAGGGCTGATGATCCAGCTGCGATGAAAGATTTCATTCTTAGTGTTCAGAATACATCAAATAAGTTGAAAGCTTCCTCTGAAGATGATCATGAAAAGAAAATTAGTAAAAGGATGGAGTTCATGCTTGAAACCATATGTGATATCAAGAACAACAAAAGCAGGCCAAAAGAGGACCCTGCACATCACACTCGAATTAAAAAGTGGTTACAGAAGTTAAGAGTTGATGACACTTTGATTAGAGGGCTAAAATGGAGCAAGTTACTTGATCCTGACAAGAAGGGCCAATGGTGGTTGTCTGGAGATGTGATTTCTGCAACAGATAATGTTGAAGAAGTTGCTAACAAAATAGACAAAGATGTTCTTGAAACCCAACGAATGCTGCAGCTTGCTGCTGCTCAAAAGATGAACACAGATTCCAGAAAGGCAATCTTTTGTATTATAATGAGTGGGGAGGACTATATTGATGCATTTGAGAAGCTTCTAAGACTGGAATTACCAGGCAAGCAGGACAGAGATATAATGCGGGTTCTTGTGGAGTGTTGCTTGCAAGAGAAAGTTTTTAACAAGTATTATACCGTGCTGGCTTCCAAGTTGTGCGAGCATGACAAAAATCACAAGTTCACTCTACAGTTTTGCCTGTGGGACCACTTCAAGGAGCTGGAGTCAATGCCGCTATTGAGGTCAATGCACCTGGCAAAGTTTGTGGCTGAAATGATTGCCTCTTTCACTCTCTCCCTTGCAGTTTTAAAGACTGTGGATCTGAGTGATATCACCCAGTTAACACCAAGAAGGATTATGCATTTCCGCATCCTGTTTGAGGCCATTTTTGAGTATCCTGAAAACATGGTGTGGAATATATTCACACGTACAGCAGTGACCCCTGAAGAAAGTCTTCGACAAGGCATTGAGTTTTTCATCAAGGAGTACGTTGTGAAAACCAACAAAGCTCTAACTCAAAAATTTAAGTTGGCAAAAAAAGCCCTTAATAATGTGGAAGGTGTTCTGATGTGA 2361 0.4142 MEEQTAQKSRRERRKESRLAKNASKHQSWLHHQKSRAMKSSNHNSELKAKNELDQSVSPSLNETQVVKLEYVSGKHETAEESTVSGKIHGSVAKKMSKGSLKSSKKKRAEIGVSVTELSIAAMKDLELERKLSKKLKVKEGKLRGLDDGLNVLLEGMSSATDLIEEGEVPGTGGLPEKRLKKGSSHKKQKLSWGGMEGESLDGVSGHVETSNQDVTSEEVTDSVPSRKKHKKRKFLGQEQEDNVEDDAVCISKPVESNGTEVMSGDVPAEVPVKRAKEKYIAPHLRARAGNEPEEHTQIRRRVRGLLNRLSESNVESITGELSMIFQSVPRSVASQIMIEEILASCSSGPRGNEQYAAVFAAFVAGMACLVGIDFSAKFMASFAKCFEDEYQKEDNLSLRNLTLLFSYLFIFGVCSSDLIYDFLVMLSKRLTEADVSIILAVLQCCGMKIRADDPAAMKDFILSVQNTSNKLKASSEDDHEKKISKRMEFMLETICDIKNNKSRPKEDPAHHTRIKKWLQKLRVDDTLIRGLKWSKLLDPDKKGQWWLSGDVISATDNVEEVANKIDKDVLETQRMLQLAAAQKMNTDSRKAIFCIIMSGEDYIDAFEKLLRLELPGKQDRDIMRVLVECCLQEKVFNKYYTVLASKLCEHDKNHKFTLQFCLWDHFKELESMPLLRSMHLAKFVAEMIASFTLSLAVLKTVDLSDITQLTPRRIMHFRILFEAIFEYPENMVWNIFTRTAVTPEESLRQGIEFFIKEYVVKTNKALTQKFKLAKKALNNVEGVLM. 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03577 786 ProSiteProfiles MI domain profile. 588 704 IPR003891 -
Seca2g03577 786 SUPERFAMILY ARM repeat 293 503 IPR016024 -
Seca2g03577 786 MobiDBLite consensus disorder prediction 1 22 - -
Seca2g03577 786 SMART ma3_7 589 695 IPR003891 -
Seca2g03577 786 MobiDBLite consensus disorder prediction 166 242 - -
Seca2g03577 786 SMART if4_15 300 502 IPR003890 GO:0003723|GO:0005515
Seca2g03577 786 FunFam MIF4G domain-containing protein / MA3 domain-containing protein 267 548 - -
Seca2g03577 786 Gene3D - 269 549 - -
Seca2g03577 786 PANTHER CELL CYCLE CONTROL PROTEIN CWF22-RELATED 3 781 - -
Seca2g03577 786 MobiDBLite consensus disorder prediction 205 220 - -
Seca2g03577 786 MobiDBLite consensus disorder prediction 1 60 - -
Seca2g03577 786 Pfam MA3 domain 590 691 IPR003891 -
Seca2g03577 786 Pfam MIF4G domain 301 502 IPR003890 GO:0003723|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03577 Seca-Chr2 110952918 110963619 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03577 K17583 - gmx:100780608 1192.56