Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03550 ATGGATAACGTGGCGAAATCCTATTGGAGAAACCGAAAACAACCGGAGGATAAGAAACTTGAGAGAGTAGCATATCCCCGCCATTTAAAATCCTTCCCTCAAATAACAAACCCTTGCGCTTCTTTGTTTCGACTTTCGAGCGATAGACTCTTCCCTCCCTTTCTCCTCCTCCTTCTTCCTTTCCTATCGCACAGCAAGGCAACACTCAACTCAACTCCGCAACCCTCTCTCTCTCTCCCTATCGAATCCACAACGATGGCGAGCGATCCAACCCAAACCCAGACCCAAGTTGCCCTCATCCTTGGACCCGATTCGAGCCATTTGGAATCCCTAATCACAAATCTAATGTCCTCTTGGAACGAGCAACGTTCACAGGCGGAGACGCTCTTCAATCTGTGTAAACAGGCTCATCCTGATTCCCTTATCCTCAAACTCGCTCAACTCCTCCACTCATCACCGAACCCAGAAACCCGAACCATGTGCACCATCCTTCTCCGCCGCCACCTCACGCGCCACCACGATTCCTTCCTCTGGCCCCACCTTTCCACCTCCACTCGCTCCACCCTCCGTTCTCTTCTCCTGTCTTCCCTCCACCAAGAACCTATCAAGTCTATCTCCAAGAAGCTATGCGACACCGTTTCGGAACTTGCCTCCGCCATCCTCCCTGATGACCCCGCCGCCTGGCCTGACCTTCTCCCTCTCCTCTTCCAGTGGGTTACCTCCCCCGACCCGAGGCTTCAGGAAATTGCTCTGCTCATATTCGCTCAATTGGCTCATTATATCGGCGAAACCCTACTCCCTCAATTGACCACCCTTCACTCCGTCTTCCTCCGATGCCTCAGCGCCGCCACGTCATCTGATGTCCGCCTCGCTGCCCTCGCTGCCAGTATCAACTTTGTTCAGTGCCTCTCCAGTTCCGCCGACCGGGACAGGTTCCAGGATTTGCTGCCCCTCATGATGCAGACCTTGACTGAGGCGCTAAACTCTGGCCAGGAGGCCACTGCACAGGAGGCCCTTGAGCTCCTCATCGAGCTTGCTGGGACTGAGCCTCGGTTCCTTCGCAGGCAGATTGTGGATGTTGTTGGCTCCATGTTGCAGGTTGCTGAGGCTGAGTCCCTTGAAGAAGGGACCCGGCATTTGGCTATTGAGTTTGTTGTGACACTTGCTGAGGCGAGGGAGCGTGCACCCGGGATGATGAGAAAGTTGCCGCAGTTCGTGCGGAAGCTGTTTGGTGTGCTGATGAATTTGTTGCTAGATATTGAGGATGATCCGGCATGGCATGGTGCGGAGACTGAGGATGAGGATGCCGGTGAGACCAGTAACTATGGGTTTGGACAGGAGTGTTTGGACAGACTTTCAATTTCTTTGGGTGGGAACACGATAGTGCCAGTTGCTTCCGAATTGTTGCCAGCTTACTTGGCTGCACCTGAATGGCAAAAGCACCATGCTGCACTCATTGCATTTGCACAAATTGCAGAGGGTTGTTCAAAGGTGATGATAAAGAATCTGGAGCAGGTATTGTCAATGGTTTTAAATTCATTTCGCGATCCCCACCCCCGGGTACGGTGGGCAGCTATAAATGCAATTGGGCAATTGTCCACAGATTTGGGGCCAGACTTGCAGGTTAAATATCACCACCTAGTGCTGCCTGCATTAGCTGGAGCCATGGATGATTTTCAAAATCCCCGAGTACAGCATTTTGTTACTTGTATGTTGCAGGCTCATGCTGCTTCTGCGGTGCTAAATTTCACTGAAAATTGTACCCCAGATATCCTGACACCTTATTTAGATGGGATTGTGAGCAAACTTCTTGTACTCCTTCAGAATGGGAAGCAAATGGTTCAAGAAGGGGCTTTGACAGCATTAGCATCAGTTGCTGATTCCTCACAGGAGCAATTTCAGAAGTATTATGATGCTGTGATGCCATACTTAAAAGCTATTTTGATGAATGCAAATGATAAATCTAATCGTATGCTTCGTGCCAAAGCAATGGAGTGCATTAGTCTGGTAGGAATGGCTGTTGGAAAGGAGAAGTTCAGGGACGATGCCAAACAGGTCATGGATGTCTTGATGTCACTGCAACAGTCTCAACTGGATGCTGATGATCCAACTGCAAGTTACATGTTACAAGCATGGGCGCGGCTTTGCAAGTGCCTTGGGCAGGATTTTCTCCCATATATGGGTTTTGTCATGCCTCCTTTGCTTCAGTCTGCACAACTTAAGCCGGATGTGACCATTACATCAGCTGATTCTGATGCTGAATTTGATGAAGATGATGACAGTATTGAAACAATCACTCTTGGGGATAAAAGGATAGGCATTAAGACCAGTGTCCTGGAGGAGAAGGCTACGGCTTGTAACATGCTATGTTGCTATGCTGATGAGTTAAAGGAAGGATTTTTTCCTTGGATTGACCAGGTTGCTTTCACATTGGTTCCTCTTCTTAAATTTTACTTCCATGAAGAAGTTAGGAAGGCAGCAGTTTCAGCTATGCCAGAACTGTTGTCCTCAGCAAAGTCAGCTGTAGAGAAGGGACAATCACAAGGTCGTGATGAGACTTACATAAAACAGCTGACTGATTATATAATACCAAATTTAGTGGAAGCTTTACATAAGGAGCCAGAGGTAGAAATTTGTGCAAGCATGTTGGACGCATTGAATGAATGCATACAGGTCTCTGGACTACATCTAGATGAAAAGCAAGTAAGGAGCATTGTTGATGAGATTAAGCAAGTCATTACAGCCAGTTCATCAAGAAAACATGAAAGAGCAGAGAGGGCAAAGGAAGAGGATTTTGATGCTGAAGAAAGAGAACTACTCAAGGAAGAAAATGAGCAAGAAGAAGAACTTTTTGATCAAATTGGTGATTGCTTGGGGACTTTGATAAAAACATTCAGGGCATCGTTTTTGCCTTTCTTTGATGAGCTTTCATCTTACCTAACACCTATGTTTGGTAAAGATAAAACCTCAGAAGAAAGAAGGATTGGCATTTGTATATTTGATGATGTAGCTGAGCACTGTCGTGAAGCAGCTCTTAAATATTATGATTCGTACCTTCCCTTCTTGCTTGAAGCTTGCAATGATGAATGTTCAGATGTTCGACAGGCAGCTGTTTATGGGGTTGGAGTTTGTGCGGAGTTTGGCGGATCAGTTTTCAAACCCCTTGTTGGAGAGGCACTTTCAAGGTTAAATGCTGTGATAACGCATCCAAATGCACTGCATTGTGATAATGTAATGGCATATGACAATGCTGTTTCAGCTCTTGGAAAAATATGCCAGTTCCACCGTGATAGCATAAATGCAACACAGGTTGTTCCTGCCTGGCTAAGTTGCTTGCCTATAAAAGGTGATTTGATTGAGGCTAAGGTTGTGCATGATCAACTCTGTTCAATGGTTGAAAGATCAGATAGTGAACTTATAGGTCAAAACAATCAATATCTTCCCAAAATTGTTGCAGTTTTTGCTGAGATTTTATGTGCGGGAAATGATCTGGCTACTGAACAAACTGTCAGTCGGATTATTAATTTATTGCGGCAGCTGCAACAGACTTTGCCACCTTCTACCCTTGCTTCAACCTGGTCATCCTTGCAGCCTCAGCAGCAGCTTGCACTTCAGTCCATCCTATCATCCTAG 3633 0.4668 MDNVAKSYWRNRKQPEDKKLERVAYPRHLKSFPQITNPCASLFRLSSDRLFPPFLLLLLPFLSHSKATLNSTPQPSLSLPIESTTMASDPTQTQTQVALILGPDSSHLESLITNLMSSWNEQRSQAETLFNLCKQAHPDSLILKLAQLLHSSPNPETRTMCTILLRRHLTRHHDSFLWPHLSTSTRSTLRSLLLSSLHQEPIKSISKKLCDTVSELASAILPDDPAAWPDLLPLLFQWVTSPDPRLQEIALLIFAQLAHYIGETLLPQLTTLHSVFLRCLSAATSSDVRLAALAASINFVQCLSSSADRDRFQDLLPLMMQTLTEALNSGQEATAQEALELLIELAGTEPRFLRRQIVDVVGSMLQVAEAESLEEGTRHLAIEFVVTLAEARERAPGMMRKLPQFVRKLFGVLMNLLLDIEDDPAWHGAETEDEDAGETSNYGFGQECLDRLSISLGGNTIVPVASELLPAYLAAPEWQKHHAALIAFAQIAEGCSKVMIKNLEQVLSMVLNSFRDPHPRVRWAAINAIGQLSTDLGPDLQVKYHHLVLPALAGAMDDFQNPRVQHFVTCMLQAHAASAVLNFTENCTPDILTPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQEQFQKYYDAVMPYLKAILMNANDKSNRMLRAKAMECISLVGMAVGKEKFRDDAKQVMDVLMSLQQSQLDADDPTASYMLQAWARLCKCLGQDFLPYMGFVMPPLLQSAQLKPDVTITSADSDAEFDEDDDSIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAFTLVPLLKFYFHEEVRKAAVSAMPELLSSAKSAVEKGQSQGRDETYIKQLTDYIIPNLVEALHKEPEVEICASMLDALNECIQVSGLHLDEKQVRSIVDEIKQVITASSSRKHERAERAKEEDFDAEERELLKEENEQEEELFDQIGDCLGTLIKTFRASFLPFFDELSSYLTPMFGKDKTSEERRIGICIFDDVAEHCREAALKYYDSYLPFLLEACNDECSDVRQAAVYGVGVCAEFGGSVFKPLVGEALSRLNAVITHPNALHCDNVMAYDNAVSALGKICQFHRDSINATQVVPAWLSCLPIKGDLIEAKVVHDQLCSMVERSDSELIGQNNQYLPKIVAVFAEILCAGNDLATEQTVSRIINLLRQLQQTLPPSTLASTWSSLQPQQQLALQSILSS. 1211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03550 1210 Pfam Interferon-related developmental regulator (IFRD) 583 719 IPR007701 -
Seca2g03550 1210 SMART TOG_3 455 704 IPR034085 -
Seca2g03550 1210 Gene3D - 104 1209 IPR011989 -
Seca2g03550 1210 ProSiteProfiles HEAT repeat profile. 506 544 IPR021133 -
Seca2g03550 1210 SUPERFAMILY ARM repeat 107 1049 IPR016024 -
Seca2g03550 1210 PANTHER IMPORTIN BETA 111 1182 IPR040122 GO:0006606
Seca2g03550 1210 Coils Coil 925 949 - -
Seca2g03550 1210 Pfam Importin repeat 6 879 982 IPR041389 -
Seca2g03550 1210 Pfam HEAT-like repeat 481 532 - -
Seca2g03550 1210 Pfam HEAT repeat 1019 1046 IPR000357 GO:0005515
Seca2g03550 1210 Pfam Importin repeat 372 463 IPR041653 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03550 Seca-Chr2 110219840 110234936 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03550 K20222 - gmx:100797431 1937.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03550 2 110219840 110234936 Seca2g03550 2 110219840 110234936 ECH