Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03529 ATGAGACCCCCAAGAGGCGGTGGCCGAGGAGGTGGTTTCAGAGGTGGCCGGGACGGAGGCGGTTTCAGAGGTGGCCGGGATGGAGGCGGTTTCAGAGGCAGAGGTGGCTTTGGAGGTCGCGGTGGACGCGGCGGCGGCGGGTTTCGCGATGAAGGACCACCTACCGAAGTCGTAGAGGTCTCAACGTTTATGCATGCGTGTGAGGGAGACGCGGTGACAAAGCTTACGAATGAGAAAATTCCCTTTTTTAATGCTCCTATATATCTGCAGAACATGACTCAGATTGGGAAAGTTGATGAAATATTTGGCCCAATCAATGAATCTTACTTTTCAATTAAAATGATGGAAGGGATTGTTGCTACTTCATATTCAGCGGGTGACAAGTTCTATATTGACCCAAGGAAACTGTTGCCTCTTGCAAGATTTCTTCCACAACCAAAGGGACAAGCACAAGCTGGTAGAGGTGGAGGTCGTGGTGGAGGCAGAGGTGGCCGTGGAGGTGGTGGTTTCCGTGGAAGGGGTGGCCCAAGGGGTGGAAGAGGTGGTCCTCCTAGGGGTGGTGGACGGGGTGGTGGTTTCAGGGGAAGGGGGAGATCATAG 600 0.5367 MRPPRGGGRGGGFRGGRDGGGFRGGRDGGGFRGRGGFGGRGGRGGGGFRDEGPPTEVVEVSTFMHACEGDAVTKLTNEKIPFFNAPIYLQNMTQIGKVDEIFGPINESYFSIKMMEGIVATSYSAGDKFYIDPRKLLPLARFLPQPKGQAQAGRGGGRGGGRGGRGGGGFRGRGGPRGGRGGPPRGGGRGGGFRGRGRS. 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03529 199 Gene3D Probable tRNA pseudouridine synthase domain 53 144 IPR038664 -
Seca2g03529 199 MobiDBLite consensus disorder prediction 1 54 - -
Seca2g03529 199 Pfam Gar1/Naf1 RNA binding region 57 143 IPR007504 GO:0001522|GO:0042254
Seca2g03529 199 MobiDBLite consensus disorder prediction 146 199 - -
Seca2g03529 199 FunFam H/ACA ribonucleoprotein complex subunit 53 144 - -
Seca2g03529 199 SUPERFAMILY Translation proteins 58 132 IPR009000 -
Seca2g03529 199 PANTHER NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 28 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03529 Seca-Chr2 109480051 109482847 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03529 K11128 - gmx:100788981 211.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03529 2 109480051 109482847 Seca2g03529 2 109480051 109482847 ECH