Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03445 ATGTTGCCTGGGTCATATAACTCTGTCTCCGTTCATCTTGGTGGTATTACTGTTCCCTCTGATCCTTTGGTGCAACTTGTTTTTGATTCCACCCTTGCTGTTAGACCATCACTGAAGAAGCCTTGTTCTTCCTTCTCTCTGCTCTGGAACCGTAACACCATCATTTGTGGGAGGAGGAGGAGGAATTCAATGGCTTCCAATCTCAGAACCAACAATTACCTGCGCCATGTTGAATCAATGAAGCAGCTTCCATCTGGTGCTGGCCACATTTCTCACCTCAACGCTGTGATTCTTGGTGAATCTCTTGCCTCTGAGGAGGATGATTTCGTTCTTCCAAGCAAGGAATTCGCTAGCCAAGCAAATGTTCAGTCCCCAGAACAGTATTTGAAGATGTATAAGAGATCGGTTGAGGACCCTGCTGGATTCTGGTCTGAAATTGCATCAGAGTTCTATTGGAAAGAGAAATGGGGTGATAAAGTCTGTAATGAAAATTTTGATGTCAGGAAAGGAAAAATTACTATTGAGTGGTTCAAAGGTGGCATCACCAACATCTGTTATAATTGCTTGGATAGAAATGTTGAAGCTGGGCTTGGTGACAAAATTGCCATTTATTGGGAAGGCAATGAGCCTGGTGTAGATGGTACACTAACATACACTCAGCTTCTCCATCAAGTTTGCCAGGTTGCAAACTACCTGAAAGATATTGGTGTAAAAAAGGGAGATGCTGTAATTATTTATTTGCCCATGCTAATGGAGCTTCCCATCACAATGCTTGCCTGTGCCCGCATTGGTGCTGTTCATTCGGTTGTATTTGCCGGTTTTTCTGCAGAATCTCTTGCCCAGAGAATCATTGATTGTAAACCAAAAGTTGTAATTACTTGCAATGCTGTCAAAAGGGGCTCTAAGGTTATCCATCTGAAAGACATAGTTGATACTGCCATCAATGAGTCAGCCCAAAATGGGGTCTCTATAGATGTATGCCTAACTTATGAAAACCCATTTGCAATGAAGAGGGAAGATACCAAATGGAAGGAAGGGCGAGATATATGGTGGCAGGATGTCATTCCTCAATATCCAACTACTTGTCCAGTGGAGTGGGTTGATGCAGAAGATCCACTTTTCCTACTCTATACAAGTGGTAGTACAGGAAAACCTAAGGGTGTCCTTCATACAACTGGTGGTTACATGGTGTACACTGCAACGACATTTAAGTATGCATTTGATTACAAGCCATCTGACATCTACTGGTGTACAGCTGATTGTGGTTGGATTACAGGGCACAGCTATGTCACTTATGGACCTATGCTCAATGGTGCAACTAACATTGTGTTTGAAGGGGCTCCTAATTATCCTGATCCTGGGCGTTGTTGGGACATTGTTGACAAATATAAAGTGACAATATTCTACACTGCTCCCACATTGGTGCGGTCCCTCATGCGTGAGAGTGAGGAGCATGTCACTCGCTACTCAAGGAAATCTTTACGAGTCCTGGGAAGTGTAGGCGAGCCCATAAACCCAAGTGCATGGAGGTGGTTTTACAATGTAGTTGGAGATTCAAGATGCCCTATCTCTGACACTTGGTGGCAGACAGAAACTGGTGGCTTCATGATAACTCCACTACCAGGTGCTTGGCCCCAGAAGCCTGGTTCTGCAACTTTCCCTTTCTTTGGAGTTCAGCCTGTCATAGTAGATGAGAAAGGTGTTGAAATAGAAGGTGAGTGTAATGGTTATTTGTGTGTTAAGAGATCATGGCCCGGGGCATTTAGAACTCTGTATGGTGATCATGAAAGATACGAAACAACATATTTCAAGCCATTTGCTGGCTACTATTTCAGTGGTGATGGCTGCAGCAGGGATAAAGATGGATACCATTGGCTCACAGGAAGAGTTGATGATGTCATCAATGTCAGTGGGCATCGTATTGGCACAGCTGAAGTGGAATCAGCTCTAGTTTCACATCCTAAATGTGCAGAGGCAGCTGTGGTTGGAGTGGAGCATGAGGTCAAAGGACAGGGTATCTACGCATTTGTTACACTTGTGGACGGTGTTCCTTACAGTGAAGAACTGCGGAAGGACCTCATACTCACAGTTCGAAAGCAGAAAAAGGATCACATTTGTCTGCATCATCACCAGAGTAATGGCTTCTGTGTAGTGGTTGCATCCTGGATTGACCAGATAGGAGCCTTTGCAGCACCTGATAAAATCCATTGGGCTCCTGGCCTTCCAAAAACAAGGAGTGGAAAGATAATGAGAAGAATTTTGAGAAAAATTGCTTCTAGGCAGCTGGATGAACTTGGAGACACGAGTACCCTTGCAGATCCAAATGTGGTCGATCAACTTATAGAACTTGCTGATTCCTGA 2361 0.4409 MLPGSYNSVSVHLGGITVPSDPLVQLVFDSTLAVRPSLKKPCSSFSLLWNRNTIICGRRRRNSMASNLRTNNYLRHVESMKQLPSGAGHISHLNAVILGESLASEEDDFVLPSKEFASQANVQSPEQYLKMYKRSVEDPAGFWSEIASEFYWKEKWGDKVCNENFDVRKGKITIEWFKGGITNICYNCLDRNVEAGLGDKIAIYWEGNEPGVDGTLTYTQLLHQVCQVANYLKDIGVKKGDAVIIYLPMLMELPITMLACARIGAVHSVVFAGFSAESLAQRIIDCKPKVVITCNAVKRGSKVIHLKDIVDTAINESAQNGVSIDVCLTYENPFAMKREDTKWKEGRDIWWQDVIPQYPTTCPVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPSDIYWCTADCGWITGHSYVTYGPMLNGATNIVFEGAPNYPDPGRCWDIVDKYKVTIFYTAPTLVRSLMRESEEHVTRYSRKSLRVLGSVGEPINPSAWRWFYNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECNGYLCVKRSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPKCAEAAVVGVEHEVKGQGIYAFVTLVDGVPYSEELRKDLILTVRKQKKDHICLHHHQSNGFCVVVASWIDQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPNVVDQLIELADS. 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03445 786 ProSitePatterns Putative AMP-binding domain signature. 375 386 IPR020845 -
Seca2g03445 786 FunFam Acetyl-coenzyme A synthetase 109 631 - -
Seca2g03445 786 Pfam Acetyl-coenzyme A synthetase N-terminus 128 188 IPR032387 -
Seca2g03445 786 SUPERFAMILY Acetyl-CoA synthetase-like 115 781 - -
Seca2g03445 786 Pfam AMP-binding enzyme 197 636 IPR000873 -
Seca2g03445 786 Pfam AMP-binding enzyme C-terminal domain 645 748 IPR025110 -
Seca2g03445 786 NCBIfam acetate--CoA ligase 123 700 IPR011904 GO:0003987|GO:0016208|GO:0019427
Seca2g03445 786 CDD ACS 126 773 - -
Seca2g03445 786 PANTHER ACETYL-COENZYME A SYNTHETASE 724 782 - -
Seca2g03445 786 Gene3D - 632 786 IPR045851 -
Seca2g03445 786 Gene3D - 108 631 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03445 Seca-Chr2 106297698 106308097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03445 70 785 Acyl Lipid Metabolism Gene Families AT5G36880 81.704 0.0 1245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03445 K01895 - gmx:100789257 1406.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03445 2 106297698 106308097 Seca2g03445 2 106297698 106308097 ECH