Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03432 ATGCCCCTATCCACTCCCGCCTCGCCGCCGCCGGCGTCAGAAGAGGGATGGTTACCTCACGACGGTGACGATTACAGCATTAACAACGACGACGGCGCTTCGTTCAGCGTCGTTTCACTGGACGACGAGGGTTTCCCGTCACAAGTCCCCGGCGAAGACGGTTCACCAAGCCGATCTGACACTGCATCGGAAAAGAGCAGTTTCGCCGCCGATTTCTATCGCTGCGGAACCGATTGGTCCTCGTTGTTGTCTCCCGAACACAGGGATCTCGCGCGCGATTCGATACCTTCAGAGAAGAAGCTGAAGCAGGCCAATCTGTTCCAGATTTGGGGCTTCAAAAGAAACGGCACCGTTAGTTCTGTTGAATCTGAACCCAATCGAAGTAGTTATCGTGATGACGGAGGTGAGGGCGGCGTTTCTTCTGAGAGGAAGATTGTGAAACCTGGAAATTGGGGTTCGATTTTGCGTGACACTGGGAAAGCTTTGGAGAGCCCAAAGTCTTCTCGCAAGAGAAAAAATTCCTATGGAGAAAATAGGGTTACACGTGCATGCCCCTTTTATAAGAAAATGCCAGGGACAACGTTCACTGTTGATGCTTTTCGTTATGGGTGTATTGAAGGGTGTTCAGCATATTTTCTTAGCCATTTCCATTATGATCACTATGGTGGCCTTAGCAAGAAATGGTCACATGGCCCTATTTATTGCTCACCTCTCACGGGACGGCTAGTTCAAATGTGTCTCTCGGTAAATCCTTTGTACATATACCCTTTGGAATTTAACACTGAACATGTGATTGATGGTGTCAAGGTGACTTTGTTAGAAGCTAATCATTGCCCTGGTGCAGCTTTGATTCACTTTGACCTCCCAAATGGACAATGTTATTTGCACACTGGGGACTTTAGAGCTTGCAAACAAATGCAAAGTTATCATCTTCTCGTAAACCAACGTGTGAATGAACTTTATTTGGATACCACATATTGCAACCCAAAGTACAGTTTCCCGTTGAAGGAAGATGTACTCAATTATGTTGTCAAAATAACGAAGAACCACCTCAAAATTCATCCCAAAACTTTAGTGGTTGTTGGGGCATATAGTATTGGCAAAGAATGTGTATATCTTGCAATTTCTAAGGCACTTGAGGTAAAAATTTATGCAAATGCCTCAAGAAGGCGGATTTTGCTAGCTTTTGGTTGGCCAGACATTTCAGATAGACTCTGTACAAATGGAAGTAGCACACGTCTTCATATTCTGCCCATGTCATCTCTAAGACTTGAGACCTTAAAGGATTACTTGAAGACCTACAAGGAACAATTCACATCAATATTGGCATTTCGTCCAACAGGTTGGACTTTCAGTGAGAAGATACGCAACGATCTGGAACTAATTAAACCTGTTTCCAAAGGAAATATCACGATATATGGGGTTCCCTACAGTGAGCACTCCAGCTTCACAGAACTGCGAGATTTTGTTCAGTTTTTGAAGCCTGACAAGATAGTTCCTACTGTGAATGTCGGGAATGCTGCTAATCGAGAAAAGATGCAATCTTACTTCCAGGAGTGGTTGAAGGGCTAA 1572 0.4472 MPLSTPASPPPASEEGWLPHDGDDYSINNDDGASFSVVSLDDEGFPSQVPGEDGSPSRSDTASEKSSFAADFYRCGTDWSSLLSPEHRDLARDSIPSEKKLKQANLFQIWGFKRNGTVSSVESEPNRSSYRDDGGEGGVSSERKIVKPGNWGSILRDTGKALESPKSSRKRKNSYGENRVTRACPFYKKMPGTTFTVDAFRYGCIEGCSAYFLSHFHYDHYGGLSKKWSHGPIYCSPLTGRLVQMCLSVNPLYIYPLEFNTEHVIDGVKVTLLEANHCPGAALIHFDLPNGQCYLHTGDFRACKQMQSYHLLVNQRVNELYLDTTYCNPKYSFPLKEDVLNYVVKITKNHLKIHPKTLVVVGAYSIGKECVYLAISKALEVKIYANASRRRILLAFGWPDISDRLCTNGSSTRLHILPMSSLRLETLKDYLKTYKEQFTSILAFRPTGWTFSEKIRNDLELIKPVSKGNITIYGVPYSEHSSFTELRDFVQFLKPDKIVPTVNVGNAANREKMQSYFQEWLKG. 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03432 523 CDD SNM1A-1C-like_MBL-fold 172 329 - -
Seca2g03432 523 SUPERFAMILY Metallo-hydrolase/oxidoreductase 206 517 IPR036866 -
Seca2g03432 523 MobiDBLite consensus disorder prediction 126 140 - -
Seca2g03432 523 Gene3D - 332 480 - -
Seca2g03432 523 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 180 514 - -
Seca2g03432 523 FunFam DNA cross-link repair 1A 190 355 - -
Seca2g03432 523 MobiDBLite consensus disorder prediction 118 145 - -
Seca2g03432 523 FunFam DNA cross-link repair 1A 332 480 - -
Seca2g03432 523 MobiDBLite consensus disorder prediction 1 66 - -
Seca2g03432 523 Pfam DNA repair metallo-beta-lactamase 400 506 IPR011084 -
Seca2g03432 523 MobiDBLite consensus disorder prediction 52 66 - -
Seca2g03432 523 Gene3D - 191 502 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03432 Seca-Chr2 105834468 105837894 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03432 K15340 - gmx:100790844 841.647