Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03424 ATGATTTACTTATATTTTCTTATGCATTTTGACAGATGTATTCCCTATAGATGGAAAAAGGACAACATAGATCAAATGGGAGAAATTGAGGAAATAATAGAAGTACTTATGGTTTCTTCACCAAAACGTGATGACTTTATATTTCCAAAGGGTGGATGGGAGGATGATGAGACTGTTACAGAAGCTGCTTGCCGCGAAGCCTTAGAAGAAGCAGGAGTTAAAGGAATACTAAGAGAAGTTCCATTAGGAATATGGGAATTCAGAAGCAAAAGCAGTCAGGACTTATGTAGCATGGAAGGAGGCTGCAGAGGATACATGTTTGCCTTGGAGGTGACTGAAGAACTCGAGGCTTGGCCAGAGCAGAAAAACCGTGCTCGCCAATGGTTAAACATAAAAGAGGCATTTAGACTGAGTCGATATGACTGGATGTGCAATGCACTGGAGGAGTTTTTGAGAGTTATGGCAGAAGATGGAAAGCTTGAGAATCAAGACAAGAATGTTGTTCCCCCTTCAATTCTAGTAGCAGATGTGTCAGAATGTCAAAGTGTGTCACAAAACTGCTATAAAAGATCCTCTACTATGCAGCACCATGGTATGCCTTCTAATGCCAATCTCCTGCAACGTGCTTCTCAAGAGATAACCATCCATTTTGGTTATTGA 660 0.4076 MIYLYFLMHFDRCIPYRWKKDNIDQMGEIEEIIEVLMVSSPKRDDFIFPKGGWEDDETVTEAACREALEEAGVKGILREVPLGIWEFRSKSSQDLCSMEGGCRGYMFALEVTEELEAWPEQKNRARQWLNIKEAFRLSRYDWMCNALEEFLRVMAEDGKLENQDKNVVPPSILVADVSECQSVSQNCYKRSSTMQHHGMPSNANLLQRASQEITIHFGY. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03424 219 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 12 156 - -
Seca2g03424 219 ProSitePatterns Nudix box signature. 51 72 IPR020084 GO:0016787
Seca2g03424 219 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 11 153 - -
Seca2g03424 219 ProSiteProfiles Nudix hydrolase domain profile. 18 151 IPR000086 -
Seca2g03424 219 CDD Nudix_Hydrolase_9 13 143 IPR047198 GO:0016462
Seca2g03424 219 Pfam NUDIX domain 35 142 IPR000086 -
Seca2g03424 219 SUPERFAMILY Nudix 34 161 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03424 Seca-Chr2 105607856 105612343 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03424 K07766 - gmx:100794003 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03424 2 105607856 105612343 Seca2g03424 2 105607856 105612343 ECH