Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03371 ATGAGACAGCACAAGCAGGTATTTCCGGTGAGCAATAATAACCGGCGACCGAGGATTCTATATCTGGTGTTTGCCGCTGCATTGTTCTCCCTCCTCCTCTTCTCTATCCAATCCTCTTTCTTCTCTGGTTCCCTCTCTTCAGATCGCAACTCCGAAGCCATTCGTGTCTTGTCTCACTTTCAGTCCAGTGTTCAGCAATGTGTGGCTAATAGGGGGCTCGGACTTACTGCACATATTATTGACCACTGCATGTTGATCCTTAAATACCCTGAAGGCACCAACAGTACTTGGTACAATCAGCAGTTTAAAAAATTTGAGCCTTTGGAGTATGAGTATGACGTGTGTGAGGCAATCTTATTGTGGGAACAGTACCGTAACATGACCACAGTGTTGACCAGAGAGTATCTTGACTCTCGTCCTGGTGGTTGGTTAGATTATGCTCCAAAAAGGATAGCACAATTAGGGGTAAAGAAGTGCTTTAATAAGACTCTTTGTGAAGAGAACCTCAATATATTATTACCCGCAAAACCTCCCTTTCATCCACGGCAGTTTCGTACTTGTGCTGTTGTTGGAAATTCCGGGGACCTTCTGAAGACAGAATTTGGGGAAGAAATAGATAGTCATGATGCTGTTTTCCGAGATAATGAAGCCCCTGTTAATCAGAAATATGCCAAGTACGTTGGTCTTAAGAGGGATTTCCGTCTAGTTGTAAGAGGTGCTGCTCGTAACATGGTCCCTATTCTAAAAGGGTCCGATGACGAGGTACTCATAATCAAAAGTCTGACACATAGAGATATCAATGCAATGATAAAGACTATACCGAATCCAGTCTATCTCTTCCAAGGTATTGTACTACGTCGAGGTGCCAAAGGAACTGGAATGAAATCTATTGAATTAGCGCTCTCCATGTGTGATATTATTGATATATATGGTTTCACTGTTGATCCAGGATACACTGAATGGACAAGATACTTCTCTGATCCTAGAAAGGGACACAATCCACTTCAAGGAAGAGCATACTATCAACTTCTAGAATGTCTTGGGGTAATCAGGATTCACTCCCCAATGAGATCTAAGAGGAGGCAAGATTGGTCAGATGTGCCAAGCATAGAAATGATAAGCCAAGCTCATGCAGCAGCTTTGCGCTTGAAAAGGAGTTCAGCTGATCAGGCTGGTGGTTTAGGGCAGTTTGGCAATTGTAAAGTGTGGGGCAACGTGGACCCAGACAAAAGTGAGCCTATCTCAGGATCGCCAGACATGGGTGATGTCAGGAAGTACTCAAATTATAGTAAATGGGAAGTCATGCCTTTCGAGAGTTTGAGGAAAGAAGCACAGGATCACTATCACCAGATGGAAAGGGTCTCTCTATATAAAATGGATGGCAATAGGTTGGATGATCTAGTGTGTGTGAGACATTCCTTAAAATCTGAGGTGTAA 1437 0.4328 MRQHKQVFPVSNNNRRPRILYLVFAAALFSLLLFSIQSSFFSGSLSSDRNSEAIRVLSHFQSSVQQCVANRGLGLTAHIIDHCMLILKYPEGTNSTWYNQQFKKFEPLEYEYDVCEAILLWEQYRNMTTVLTREYLDSRPGGWLDYAPKRIAQLGVKKCFNKTLCEENLNILLPAKPPFHPRQFRTCAVVGNSGDLLKTEFGEEIDSHDAVFRDNEAPVNQKYAKYVGLKRDFRLVVRGAARNMVPILKGSDDEVLIIKSLTHRDINAMIKTIPNPVYLFQGIVLRRGAKGTGMKSIELALSMCDIIDIYGFTVDPGYTEWTRYFSDPRKGHNPLQGRAYYQLLECLGVIRIHSPMRSKRRQDWSDVPSIEMISQAHAAALRLKRSSADQAGGLGQFGNCKVWGNVDPDKSEPISGSPDMGDVRKYSNYSKWEVMPFESLRKEAQDHYHQMERVSLYKMDGNRLDDLVCVRHSLKSEV. 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03371 478 Pfam Glycosyltransferase family 29 (sialyltransferase) 172 255 IPR001675 GO:0006486|GO:0008373
Seca2g03371 478 PANTHER SIALYLTRANSFERASE-LIKE PROTEIN 1 11 477 IPR044782 GO:0008373|GO:0009846|GO:0009860
Seca2g03371 478 Gene3D Glycosyl transferase family 29 148 276 IPR038578 -
Seca2g03371 478 Gene3D Glycosyl transferase family 29 277 355 IPR038578 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03371 Seca-Chr2 103412344 103424007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03371 69 349 Glycosyltransferase AT1G08660 87.544 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03371 - - gmx:100800355 832.787