Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03370 ATGCAGACAGCTTTAACCTTTGCAGCTCCCAATGTTGTGCCTTTGACACCTGCAAAGAGTGTCTCCCATCTTACCAGTTTTCCTACCAAATTGACTAGCTCACATGCTCAACCTCGTTACACTCCCATTAAAGTTGCAACCGTGAGCTATGACACTTCAACAGTAGACTACAACTCTGCATTCTCAGTGTTTCCAGCTGAAGCATGTGAAACAATTGGAGGGGAAGCTTGTATGGCAGACATGTACCCTGAAGCGAAGTTGCAGCCAGAGGCTAGGAATGCCACACCACCTGTTGCTTCAGAGAGCGTTGAGAGAGAGTATCTTGAATACAATGATCCAAAGACGGTTTTCCTAGCAGAGGCTTGTGATGATCTTGGAGGAATTTTCTGTGAGCGCGAGTATCAGAAGGGTGTCTACTAG 420 0.4643 MQTALTFAAPNVVPLTPAKSVSHLTSFPTKLTSSHAQPRYTPIKVATVSYDTSTVDYNSAFSVFPAEACETIGGEACMADMYPEAKLQPEARNATPPVASESVEREYLEYNDPKTVFLAEACDDLGGIFCEREYQKGVY. 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03370 139 PANTHER LIGHT-REGULATED PROTEIN 1, CHLOROPLASTIC 1 138 IPR009856 GO:0009507
Seca2g03370 139 Pfam Light regulated protein Lir1 1 132 IPR009856 GO:0009507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03370 Seca-Chr2 103403120 103404267 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03370 - - gmx:100305960 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03370 2 103403120 103404267 Seca2g03370 2 103403120 103404267 ECH