Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03351 ATGGTTGGCCTGCCAGTTTCCTTCAGATATGAGTACCTTATGGCTGAGACAATATTCTCTCAGCTGCTGATGCTACCACAACCGCCTTTCAAACCTGTATATTACACGCTGGTTATTATTGACCTTTGTAAGGCTCTTCCTGGAGCTTTTCCTGCAGTTGTAGCTGGGGCAGTTCGTGCTCTCTTTGAGAAGATTGCTGATTTAGATATGGAGTGTCGGACACGTCTAATCCTTTGGTTCTCACACCATTTATCAAACTTTCAGTTCATCTGGCCTTGGGAAGAGTGGGCTTATGTCTTAGAACTTCCAAGTTGGGCTCCACAACGTGTCTTTGTTCAGGAGGTTTTGGAAAGGGAAGTTCGCTTGTCATACTGGGACAAAGTTAAGCAGAGCGTTGAAAATGCTCCTGGTTTAGAAGAGTTGCTTCCTCCAAAGGGTGGACCGAACTTGAGTTTTGGTGCAGAAGATGGTAAAGAAAACAATGAACATGTGCTGTCTGGAGAGCTCAACAACATGGTTAAAGGGAAGGTACCTGTTCGTGAAATAATCTCATGGATTGATGAAACTGTGTTTCCAAATAATGGTCTAGAAGTTACCCTCAGAGTGGTTGTACAAACTCTTCTCAATATTGGATCCAAAAGTTTCACTCATTTGATGACTGTGTTAGAGAGATATGGGCAAGTCATTGCAAAAGTATGTCCTGACCAGGATAATCAAGTCATGCTGATAGCTGAAGTGAGTTCTTTCTGGAAGAGTAACACCCAAATGACAGCAATAGCCATTGACAGGATGATGGGTTATCGGCTTGTATCAAATCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAAAATACTGATCAATTCCATACATCAGATCGTCCTTGGGAGATTCTTAGAAATGCAGTAAGCAAGACATACAATCGTAATTCTGATTTAAGAAAAGAGATATTGGCTCTTAAAAAGAACATTTCATCAGCCGAAGAAGCTGCCAAAGAGGCAAAGGCAGAGTTAGATGCTGCAGAGTCAAAACTCTCACTAGTGGATGGTGAACCAGTTCTTGGTGAAAATCCTGTTAGGTTGAATAGACTGAAATCACATGCTGAAAAAACAAAGGAGGAGGTGGTGTCTCTTCAGGAATCCTTAGAAGCTAAGGAAGCTCTTCTTGCCCGAGCAGCTGATGAAAATGAGGCCCTGTTTCTCTTGTTGTACAAAAGCTTCTCAAATGTATTGATGGAGCGCCTTCCCACAGAATCAGGAGCTAGAACACTGCGTGAATTGAAGGCGGCACAAGTTGATGAGATGGCAGTGGACCCTGAAGAACCATCATTGATGGAATTAGACAGTGAGAATCAGAGGCCTCAAAACAGTCAGTCAAATGGTAGGAAGAAAAGCGGTGCTTATAATGTTGGTGAAAAGGAACAGTGGTGTATCACCACTTTGGGCTATGTGAAGGCTTTCTCTAGGCAGTATGCTGCTGAGATATGGCCCCATATTGAAAAGTTGGATGCAGAGGTATTGACAGAAGACGCACCTCCTCTTTTTCGGTCAGCTGTTTATTCTGGTCTTCGAAGACCAATTAATGAGGCCTGA 1590 0.4314 MVGLPVSFRYEYLMAETIFSQLLMLPQPPFKPVYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRTRLILWFSHHLSNFQFIWPWEEWAYVLELPSWAPQRVFVQEVLEREVRLSYWDKVKQSVENAPGLEELLPPKGGPNLSFGAEDGKENNEHVLSGELNNMVKGKVPVREIISWIDETVFPNNGLEVTLRVVVQTLLNIGSKSFTHLMTVLERYGQVIAKVCPDQDNQVMLIAEVSSFWKSNTQMTAIAIDRMMGYRLVSNLAIVRWVFSAENTDQFHTSDRPWEILRNAVSKTYNRNSDLRKEILALKKNISSAEEAAKEAKAELDAAESKLSLVDGEPVLGENPVRLNRLKSHAEKTKEEVVSLQESLEAKEALLARAADENEALFLLLYKSFSNVLMERLPTESGARTLRELKAAQVDEMAVDPEEPSLMELDSENQRPQNSQSNGRKKSGAYNVGEKEQWCITTLGYVKAFSRQYAAEIWPHIEKLDAEVLTEDAPPLFRSAVYSGLRRPINEA. 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03351 529 PANTHER CAP BINDING PROTEIN 1 523 IPR027159 GO:0000339|GO:0005846|GO:0006406
Seca2g03351 529 Pfam MIF4G like 165 493 IPR015174 GO:0016070
Seca2g03351 529 SUPERFAMILY ARM repeat 7 143 IPR016024 -
Seca2g03351 529 SUPERFAMILY ARM repeat 143 515 IPR016024 -
Seca2g03351 529 Pfam MIF4G like 8 132 IPR015172 GO:0016070
Seca2g03351 529 Coils Coil 360 394 - -
Seca2g03351 529 FunFam Nuclear cap-binding protein 1 146 - -
Seca2g03351 529 Gene3D - 1 146 - -
Seca2g03351 529 MobiDBLite consensus disorder prediction 447 464 - -
Seca2g03351 529 Coils Coil 309 350 - -
Seca2g03351 529 Gene3D - 155 519 - -
Seca2g03351 529 MobiDBLite consensus disorder prediction 439 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03351 Seca-Chr2 102679645 102689635 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03351 K12882 - gmx:100811738 922.539