Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03331 ATGGAAAAAAACACCAACAACAACAACACCCAAAACCAATCATCCCAATACCCCTCTATACCTTCACCTACTTTCCATGGACCATCTTCATCATCATCCCCTGCCACTGAGAATTGGGGAACTCACATAATGGGCACACCAGCTGCACCAAGCAGTCACCCAGATAACAAAAAGGCAGCTTTACGAAGTGGTTCTGATGAACAACCTCAGGTTTTTCAATATTACCAACATCCTGGTCATCCTTATGTGCAGCACAGCCCTGTTGAGAAGCCAAGCAACAGCCCCATGGAATCCATTCTTCACATGTTCGATTCTTGGAGTAAAAGAGCTGAAGCCACCGCCAACAACATTTGGCACAATCTTAGAACAGGGCCTTCAGTGTCTTCAGCTGCACTAGGGAAGATGAATCTGACGGTAAAAGCGATATCAGAGGGTGGATTTGAGTCCCTTTACAAACAAACATTCACAACCTATCCAAATGAGAAGCTGAAGAAGAGCTTTGCTTGTTACCTTTCAACATCAACAGGGCCTGTTGCAGGAACCCTTTACCTCTCTAATATTCATGTCGCATTTTGCAGTGATCGCCCCTTGTGTTTCACCGCACCCTCTGGCCAAGAGACTTGGAGCTACTACAAGGTGATGGTGCCTTTGGGGAAAATTGGAGTAGTGAACCCTGTTATCATGAAGGAGAACCCTTCAGAAAAGTATATCCAAGTTGTCACAGTTGATGGCCATGATTTTTGGTTCATGGGTTTTGTTAATTTTGACAAAGCAGTTAAGAACCTCTCAGAAGGTATCTCACATTTTGTGGCGCCAGGAGTACCTTCCACTAGTTCTTGA 840 0.4476 MEKNTNNNNTQNQSSQYPSIPSPTFHGPSSSSSPATENWGTHIMGTPAAPSSHPDNKKAALRSGSDEQPQVFQYYQHPGHPYVQHSPVEKPSNSPMESILHMFDSWSKRAEATANNIWHNLRTGPSVSSAALGKMNLTVKAISEGGFESLYKQTFTTYPNEKLKKSFACYLSTSTGPVAGTLYLSNIHVAFCSDRPLCFTAPSGQETWSYYKVMVPLGKIGVVNPVIMKENPSEKYIQVVTVDGHDFWFMGFVNFDKAVKNLSEGISHFVAPGVPSTSS. 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03331 279 CDD PH-GRAM_GEM 160 268 - -
Seca2g03331 279 Gene3D - 147 267 IPR011993 -
Seca2g03331 279 SMART gram2001c 149 227 IPR004182 -
Seca2g03331 279 MobiDBLite consensus disorder prediction 1 66 - -
Seca2g03331 279 Pfam GRAM domain 152 261 IPR004182 -
Seca2g03331 279 PANTHER GEM-LIKE PROTEIN 2 43 268 IPR037848 -
Seca2g03331 279 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03331 Seca-Chr2 101894176 101895753 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03331 - - lja:Lj1g3v3902860.1 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03331 2 101894176 101895753 Seca2g03331 2 101894176 101895753 ECH