Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03324 ATGGGGTGCACTTACTCTGTGTATAGGAAGAAGAAGTCAAATTTTCCTGAAGTTGTGGTCTTAGCTCCATCAACTAGAATTCCAGTGCAATGTGATCTTCAAAGGGCACTTAAAGGATTAGTTCCACGAGATCTTGCTGATAAATTGTCTTCACTTCGGAACCAGATTGTGTTGGTAGCAGAGGATACTGGTGGATCAGCAATAGCTGAATTGCGGCGAGCTTTGAATGAATACTTGTGTGTTGTGATTGGGCTTACTAAGAAAGAGTATGGTCTAGAGGGGCTAATAGAATTCAAGTGGAAAAATTTCAATGATGGAAGACAAGATGGTAGTATAGCAAATGCCTGGTTTGAGGTGTTATCTGCCGTTCACTTTATGGCTATGCTGACACTGTCAGAGGCTGACTCACTGATGATTCCAAAGGACAATTCAGGCTCTGGATTCAGGGTTGTATCTTCAGATAGCAAGAGGGAAGCAATTGATTTGTTACTCAAGGCATCAGGATACCTAGAGTTCTGTGTCAGACATATTCTTACTAGGATACCTGCTGAAACCAAGAAAATTTTGCCCCAGGACTTGCAGGAGGGTGTGTTGGAGGCTATAGCTATTCAAGCACTAGGCCAGGGAACTGAGATTCAGCTTGGTCTTGCTGTGGAAAGTCAGAAGGCAACTTTGTCTGTGAAAAGGAGGCTGGCATGTGAACAGTTGATTTACTTTAGTCAGGCTTATCATTGCTTGTCAGGATGTGACATCAACCAAGAACATGGAAAGAAGCATCTAAGATTCATCAAATGGAAATTCCTTGAAGCCAAGGCTGCAGCTTACTACTACCATGGCCTGATCCTAGACAAGGGTAATGAACCAAGCAATCACATTGGTGCAGTGTCATGTTTTCTTGCTGCAGAAGAACTTCTGGCTGAAAGCAAGAAAGCCTGCTTGAGCTTTTGTCTTGCAGCTCCAGTCACAAGGGCTCCTCCACCCTGGGGTGCTATGAAGCATTTAAATCAGAAAATTCCTGAAGTTGCATCAAGGAAGTCCCAGATGTATGGTTACCTCTTGGAGCAAGAGAAGTAA 1074 0.4348 MGCTYSVYRKKKSNFPEVVVLAPSTRIPVQCDLQRALKGLVPRDLADKLSSLRNQIVLVAEDTGGSAIAELRRALNEYLCVVIGLTKKEYGLEGLIEFKWKNFNDGRQDGSIANAWFEVLSAVHFMAMLTLSEADSLMIPKDNSGSGFRVVSSDSKREAIDLLLKASGYLEFCVRHILTRIPAETKKILPQDLQEGVLEAIAIQALGQGTEIQLGLAVESQKATLSVKRRLACEQLIYFSQAYHCLSGCDINQEHGKKHLRFIKWKFLEAKAAAYYYHGLILDKGNEPSNHIGAVSCFLAAEELLAESKKACLSFCLAAPVTRAPPPWGAMKHLNQKIPEVASRKSQMYGYLLEQEK. 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03324 357 Gene3D alix/aip1 like domains 33 347 IPR038499 -
Seca2g03324 357 PANTHER UNCHARACTERIZED 1 356 IPR038898 -
Seca2g03324 357 ProSiteProfiles BRO1 domain profile. 15 357 IPR004328 -
Seca2g03324 357 CDD BRO1_Alix_like 11 357 - -
Seca2g03324 357 SMART BRO1_2 19 357 IPR004328 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03324 Seca-Chr2 101811569 101815859 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03324 - - gmx:100803541 625.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03324 2 101811569 101815859 Seca2g03324 2 101811569 101815859 ECH