Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03323 ATGGCTGACGCCAAAGATTCTTCTTCCTTCATGACACACACCAAATCTTCTTCTAATACCCCAACCTCATCATCCTCACAACAACACAGGACTTTCTTCATGGCTCAGAACATCCTCAGAATCCTAGCCATTGTGCTCTCAGCAGCTTCAATTGCAATCATGGTCACCAACAACCAAACAGTTTCAATCTTCACAATACGGTTCGAAGCTCACTTCTATTACTCATCATCCTTCAAATTTTTTGTTGCTGCAAATGGTGTGGTTTGTGCCATGTCTGTGCTGACACTAATAATCAACCTTGTCCTGGGACAACAAGTATCACATCGGAAAGACTACTATTTCTTCCTATTTATGCATGACATGGTGATGACGGTGTTGATAATAGCTGGATGTGCAGCAGCAACAGCAACTGGGTATGTGGGACAATATGGGGAAGAGCATATGGGTTGGATGCCAATCTGTGACCATGTGCACAAATTCTGCAAAACAAGCTTAGTTTCTCTTTTGCTTTCATATTTGTCCTTCTTTGCCTATTTGGGACTCTCAATTTCAATAGTCCACAAGTGTCTCTCTTTTTTCTCTCCTCCTAAATCAGATGGCAGACCATTACCAACAATAGGAGGCTCTATAAATTAA 636 0.4151 MADAKDSSSFMTHTKSSSNTPTSSSSQQHRTFFMAQNILRILAIVLSAASIAIMVTNNQTVSIFTIRFEAHFYYSSSFKFFVAANGVVCAMSVLTLIINLVLGQQVSHRKDYYFFLFMHDMVMTVLIIAGCAAATATGYVGQYGEEHMGWMPICDHVHKFCKTSLVSLLLSYLSFFAYLGLSISIVHKCLSFFSPPKSDGRPLPTIGGSIN. 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03323 211 NCBIfam plant integral membrane protein TIGR01569 38 186 IPR006459 -
Seca2g03323 211 Pfam Casparian strip membrane protein domain 34 177 IPR006702 -
Seca2g03323 211 MobiDBLite consensus disorder prediction 1 28 - -
Seca2g03323 211 PANTHER CASP-LIKE PROTEIN 4A4 19 183 - -
Seca2g03323 211 MobiDBLite consensus disorder prediction 7 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03323 Seca-Chr2 101761305 101762675 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03323 - - lang:109343531 231.106