Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03300 ATGCCCCCTTTGTTTTCGCATTTCGCATCGCTCCGTCTCTCTCTTTGTGATCTGCCTCGGGTCCGTCCTTTTGACCCAAACCAAACGAGCCAGCCAGCCACCTTCTTCAATGTCTTCCACACTGTGGAATTTATTTACACACTTTCCTTCTTCGATTCTCAGCTAAGATTCTCCGCGATTCCCTCAATTCTCACGCCCTCTCTCCCTTTCTCTCTCTTTCTCCTCCTCCTCGTTCTTCCTTGCCGTTTTGGGCGGTCTCAGCGTCGTTTTGCGGCCCTAGGGTGGAAAATGAAGTCCTCGCTGAGCAAGTTAAGGAGAATTGCACTTCACAAGGGTGTAGGGAAGGAGAAGAAAGAGTTTCAACCCTCCGTGAAGTTCGATGAGCTTACTCTCGCTGCCAAGGACATGCAAGAGATGAGAGATTGCTATGATAGCCTGCTTGCTGCAGCTGCTGCTACAGAAAACAGTGCTTACGAATTTGCTGAGTCGCTGCAGGAAATGGGTACCTGTCTATTGGAGAAAACTGCCTTAAATGATGATGAAGAAAGTGGTAAAGTTTTGGGGATGCTTGGAAGTGTGCAGCTTGAACTTCAGAAACTTGTTGATAGCTATGTAAGGCTTTGTTTGGGTGCAATCTTTCGATTACTTTGTTCTTCTTTAAGCATAGTTCATATGCATAACATTTATGATGACACAATCTTTTATGTTCCTCAGCGTTCTCACATAGCACTGACAATAACCAAACCATCAGAGTCTCTTCTTAATGAACTAAGAACTGTTGAGGACATGAAGCGAAAATGTGATGAAAAAAGAGATGTTTATCAATACATGCTTGCCCAACATAAAGAGAAAGGAAGGTCAAAAAGTGCTAAAGGTGAAAGTATCACTTTACAGCAGTTGCAAGCAGCTCATGATGAATATGAAGAGGAAGCAACACTTTGTGCTTTTCGGTTAAAATCCCTGAAGCAAGGCCAGTCACGTAGTCTCCTAACACAAGCAGCCCGTCATTATGCTGCTCAGTTGAATTTCTTTCGGAAGGGACTTAAATCACTGGAGGCTGTTGAGCCGCATGTTAGGATGGTTGCTGAACAGCAACATATTGATTACCAGTTCAGTGGCCTTGAAGATGATGATGGTGAAGATGGCTTTGATGATGATGGGAATGACTATGAGGTCACTGAAGGTGGGGAATTGAGTTTTAACTACAGATCAAATAAGCAAGGACCATATATTGTTTCTACATCACCAGACTCAGCTGAGGTGGAAGAATCAGGTCATTCATATGTTCGAGCTTCAACCTCAGAAACTACAGAGACAAGTTTAGACAAGAACCAAGGAGATTTTAAAGTCTCACATAGAGATCCTAGAGTCAGCAGCTATTCAGCTCCAATAATTGCTGAAAAGAAATTTGACCCAGCTGAGAAAGTAAGACAATTATTGTCATCATCATCTGCAGTAAAGCCTAATGCTTATGTACTTCCTACACCTGTTAACATCAAAGAAACAAAGACTAGCTCAGCCCCCCGCACAAGTGCAAGTGGATCTTCCCATAATTTGTGGCACTCTTCCCCTTTGGATGAGAAAAAGAATGAGAAAGATTTTGTTGATGGTAAATTGTCAGAACCAGCTATCCCTAGAGTTCACTCTGTTCTCAAAGAAAGCAACAGCGATACAACATCCACCCAGTTACCACGCCCTTCGGCAGAGGGACTATCACTTCCACAAGTTGATATTTTCAATGCTTCTGATACTAAGAAAATAAAAAGACAAGCTTTTTCAGGGCCATTGACTAATAAACCATTGTCAGTAAAACCTGTTTCAGGGACTTTTCCACGTTTACCAATCCCTCAGCCGTCCTCTCCAAAAGCATCTCCTGGTGCATCACCTCCCCTTGTTTCTTCACCTAGGATCAGTGAGCTACATGAGCTTCCTAGACCCCCTGGTAATCAATCCAGCAAGCCAATAAAATCTTCTCGAATAGGTCACTCTGCTCCATTAGTATTTAGAAATCCAGAGCATCCTGCAACTAATAAAATTCCTTCAGCTGTATCAAGTGCAGCATCTCCACTTCCAACTCCACCTATAATTGTCTCTCGGAGTTTTTCTATTCCCTCAAGTAGTCAGAGAGCTATGACATTAAATGTTACTAATACCAAATATTTGGATACTCACCAAAATCCCGAGAAGGTTGAAGAAGCTGCATCACCTCCACTAACACCTATTTCTCAGAGAGCATCAACTATACCTGACCTGGCTTCTCACTCAACTGAAATCCAAGGTAAGTTACTGTTTATTATAGTTCAATTTTGTATAAATTGGGTATCCTTTGCATTCTTTAGCTACTTGTCCTCGTATATATTAAGTGCTGGAATCCAACATATGAAGTATAATACATATTGCTAA 2403 0.4216 MPPLFSHFASLRLSLCDLPRVRPFDPNQTSQPATFFNVFHTVEFIYTLSFFDSQLRFSAIPSILTPSLPFSLFLLLLVLPCRFGRSQRRFAALGWKMKSSLSKLRRIALHKGVGKEKKEFQPSVKFDELTLAAKDMQEMRDCYDSLLAAAAATENSAYEFAESLQEMGTCLLEKTALNDDEESGKVLGMLGSVQLELQKLVDSYVRLCLGAIFRLLCSSLSIVHMHNIYDDTIFYVPQRSHIALTITKPSESLLNELRTVEDMKRKCDEKRDVYQYMLAQHKEKGRSKSAKGESITLQQLQAAHDEYEEEATLCAFRLKSLKQGQSRSLLTQAARHYAAQLNFFRKGLKSLEAVEPHVRMVAEQQHIDYQFSGLEDDDGEDGFDDDGNDYEVTEGGELSFNYRSNKQGPYIVSTSPDSAEVEESGHSYVRASTSETTETSLDKNQGDFKVSHRDPRVSSYSAPIIAEKKFDPAEKVRQLLSSSSAVKPNAYVLPTPVNIKETKTSSAPRTSASGSSHNLWHSSPLDEKKNEKDFVDGKLSEPAIPRVHSVLKESNSDTTSTQLPRPSAEGLSLPQVDIFNASDTKKIKRQAFSGPLTNKPLSVKPVSGTFPRLPIPQPSSPKASPGASPPLVSSPRISELHELPRPPGNQSSKPIKSSRIGHSAPLVFRNPEHPATNKIPSAVSSAASPLPTPPIIVSRSFSIPSSSQRAMTLNVTNTKYLDTHQNPEKVEEAASPPLTPISQRASTIPDLASHSTEIQGKLLFIIVQFCINWVSFAFFSYLSSYILSAGIQHMKYNTYC. 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03300 800 Gene3D Arfaptin homology (AH) domain/BAR domain 127 373 IPR027267 -
Seca2g03300 800 Coils Coil 290 310 - -
Seca2g03300 800 MobiDBLite consensus disorder prediction 501 521 - -
Seca2g03300 800 MobiDBLite consensus disorder prediction 611 625 - -
Seca2g03300 800 MobiDBLite consensus disorder prediction 501 575 - -
Seca2g03300 800 MobiDBLite consensus disorder prediction 639 658 - -
Seca2g03300 800 MobiDBLite consensus disorder prediction 551 568 - -
Seca2g03300 800 SUPERFAMILY BAR/IMD domain-like 239 359 IPR027267 -
Seca2g03300 800 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 239 756 IPR037488 -
Seca2g03300 800 MobiDBLite consensus disorder prediction 412 454 - -
Seca2g03300 800 MobiDBLite consensus disorder prediction 412 444 - -
Seca2g03300 800 MobiDBLite consensus disorder prediction 522 539 - -
Seca2g03300 800 SUPERFAMILY BAR/IMD domain-like 127 208 IPR027267 -
Seca2g03300 800 CDD BAR 135 357 - -
Seca2g03300 800 MobiDBLite consensus disorder prediction 590 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03300 Seca-Chr2 101182697 101191888 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03300 - - tpra:123890481 988.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03300 2 101182697 101191888 Seca2g03300 2 101182697 101191888 ECH