Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03274 ATGGGTAGCACATTCAATGCACAGATTTTAGTGGAAAAGCTAGCCAAGCTGAATGGTTCACAGACAAGCATAGAGACTTTGTCACACTGGTGCATTTTTCATATGAATAAAGCCAAACAAGTTGTTGAAACATGGTCTAGACAATTTCATTGCTCTCCTCGTGAGAAGAGATTGGCATTTCTGTATCTTGCAAATGATATTATACAAAACAGCAGGAGAAAGGGTTCTGAATTTGTAGGTGAATTCTGGAAGGTTCTTCCAGATGCTCTTCGAGATGTGATTGAAAATGGAGATGAGTTTGCAAGGAATGCGGCACTTCGACTGATTGGTATATGGGAAGAGAGGAAAGTTTTTGGTTCTCGTGGTCAAATTCTTAAGGATGAGTTTGCTGGAAGGCATGTTGAAAATAGTAGCCGTGATGTGAAACCTATGAATATGAAACTGAGGCCATCTGCCGGGAACGCATTGGAGAAAATAGTTTCAGGTTATAATGTTATTTATGGAGGACAGACGGATGAAGATGCTGTATTAAGCAAATGCAGGAATGCCATTAGCGGTCTTGAGAAAGCAGATAGGGAGATAGTTCATGATAGTAATTCAGGGAAATTCCATGGTTCTGCACTAGTGGATGAGCTCCAGGGGCATAATGCTGTACTAAAGGACTGCATCAAACAATTAACAGCAATGGAATCGTCCAGAGCTACCCTTGTGTCTCACCTGAGAGAGGCTCTCCAGGATCAGGAATTTAAGCTGGGTCAAGTTCGTAGCCAGATTCAGGCTGCACGAGTTCAATCAGAACAGGCCAGTAATACCCGCCGACAGTTACTGAATGGAAACAATATTCAGTCATTAGCTGAACAGAGTTCAAAGGAAATTCAAACCTCCATGGCACCTGCAAGTTATATGGCTGGTGATAGGGAGCAATCAGCTCCATTAATGTACACACCGCAAGTGTCATTTTCTCAAAAATCTGGACACATTGAGGAAGATCCTCGCAAGTCTGCAGCCGCTGCAGTGGCAGCAAAGCTGACTGCTTCGACGGACTCCGCCCAGATGCTATCTTTTGTGCTATCATCCTTAGCATCAGAAGGTGTCATAGGAAGTCAGATTAAAGAGTCTTCTGCTGATTATCACACTGAGAAGAGGACTAAACTTGAGAATGACCAGTCATCTTATATGCCATCTCAGAATCCTCAACAGCCACCACTTCCTCCTTTTGCACTTTCTGAATCCATGCAACACAATGCATCTACAACCAACCAGCAATCCACTCCCAATGAACCACCACCTCCACCCTCATCATCACCTCCTCCATTGCCACCACTGCCACCAATGCCACAGTACACTGTGCCGCAGTTCATGCAGACTGCTGGATCCATTAGCAGTATGGCATACAGCTATGGCATAAGTCAACAGCCATCAATGACAGCCTATACACCTGTTGGGGCTTCCTTGAATAGTGTCTCTCCTTTTCCACCTCCTCCAATGAATACATATCAGGGTTTTCAGGGTTCAGATGGAAATTACTATAGCCAACCCTCATCAATGCCTATGGCTCCCATTTCTCGGCAATAG 1575 0.4425 MGSTFNAQILVEKLAKLNGSQTSIETLSHWCIFHMNKAKQVVETWSRQFHCSPREKRLAFLYLANDIIQNSRRKGSEFVGEFWKVLPDALRDVIENGDEFARNAALRLIGIWEERKVFGSRGQILKDEFAGRHVENSSRDVKPMNMKLRPSAGNALEKIVSGYNVIYGGQTDEDAVLSKCRNAISGLEKADREIVHDSNSGKFHGSALVDELQGHNAVLKDCIKQLTAMESSRATLVSHLREALQDQEFKLGQVRSQIQAARVQSEQASNTRRQLLNGNNIQSLAEQSSKEIQTSMAPASYMAGDREQSAPLMYTPQVSFSQKSGHIEEDPRKSAAAAVAAKLTASTDSAQMLSFVLSSLASEGVIGSQIKESSADYHTEKRTKLENDQSSYMPSQNPQQPPLPPFALSESMQHNASTTNQQSTPNEPPPPPSSSPPPLPPLPPMPQYTVPQFMQTAGSISSMAYSYGISQQPSMTAYTPVGASLNSVSPFPPPPMNTYQGFQGSDGNYYSQPSSMPMAPISRQ. 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03274 524 CDD CID_RPRD_like 8 121 - -
Seca2g03274 524 MobiDBLite consensus disorder prediction 372 453 - -
Seca2g03274 524 MobiDBLite consensus disorder prediction 424 448 - -
Seca2g03274 524 ProSiteProfiles CID domain profile. 2 134 IPR006569 -
Seca2g03274 524 MobiDBLite consensus disorder prediction 477 524 - -
Seca2g03274 524 SUPERFAMILY ENTH/VHS domain 8 117 IPR008942 -
Seca2g03274 524 MobiDBLite consensus disorder prediction 498 524 - -
Seca2g03274 524 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 505 - -
Seca2g03274 524 Gene3D - 2 130 IPR008942 -
Seca2g03274 524 Pfam CID domain 9 120 IPR006569 -
Seca2g03274 524 SMART 558neu5 9 130 IPR006569 -
Seca2g03274 524 FunFam ENTH/VHS family protein isoform 1 2 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03274 Seca-Chr2 100211118 100227284 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03274 K15559 - gmx:100806108 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03274 2 100211118 100227284 Seca2g03274 2 100211118 100227284 ECH