Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03273 ATGCATTACCAAACGGCGTCGTGGGGAAGCTACGTGGCACAAAGAAGCGCAATGGTGGTTGGGGACCCATTAGAGCGCATAGAGAGGCTGGCATCAGAGAACGCAGTGGTGATATTCAGCGTGAGCACGTGCTGCATGTGCCATGCGATAAAGAGGTTGTTCTGTGGAATGGGTGTGAACCTAACAGTTCATGAGCTTGATGAAGATCCAAGAGGAAAAGACCTTGAAAGAGCCTTAATGAGGCTTCTTGGTACTTCCTCTGTTGTCCCTGTTGTTTTCATTGGTGGAAAACTTGTTGGTACCATGGACAGAGTCATGGCTTGCCATATTAATGGCACTCTTGTTCCTCTCCTCAAAGAAGCTGGTGCTCTCTGGCTCTGA 381 0.4882 MHYQTASWGSYVAQRSAMVVGDPLERIERLASENAVVIFSVSTCCMCHAIKRLFCGMGVNLTVHELDEDPRGKDLERALMRLLGTSSVVPVVFIGGKLVGTMDRVMACHINGTLVPLLKEAGALWL. 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03273 126 FunFam Glutaredoxin family protein 24 125 - -
Seca2g03273 126 SUPERFAMILY Thioredoxin-like 24 125 IPR036249 -
Seca2g03273 126 Pfam Glutaredoxin 36 99 IPR002109 -
Seca2g03273 126 PANTHER GLUTAREDOXIN 25 126 IPR011905 -
Seca2g03273 126 CDD GRX_GRXh_1_2_like 35 117 - -
Seca2g03273 126 ProSiteProfiles Glutaredoxin domain profile. 24 125 - -
Seca2g03273 126 NCBIfam glutaredoxin-like family 27 126 IPR011905 -
Seca2g03273 126 Gene3D Glutaredoxin 22 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03273 Seca-Chr2 100193208 100193588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03273 1 126 Miscellaneous Gene Families AT3G02000 63.971 2.29e-51 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03273 K03676 - gmx:100808865 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03273 2 100193208 100193588 Seca2g03273 2 100193208 100193588 ECH