Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03264 ATGCCGGAGGAAGAATTGGTGGAGCTCAAGTTCCGTCTCTACGATGGATCCGATATTGGACCCGTTCGTTACTCGCCAACTTCCACTGTAGCCATGCTCAAAGACTGGATTTTCTCAGTGTGGCCAAAAGACAAGAAAATTAATCCAAAGGCAGCAAATGATATAAAATTGATAAGTGCTGGCAAAATTTTGGAGAACAACAAGACAGTTGGCCAGTGTAGAGTACCTTTTGGTGAGCTTCCTAAAGGGGTTATTACCATGCATGTTGTTGTCCAGCCATCTCTGGTAAAAGCAAAAACAGGTAGATTTTATTCCGAAGTATATTGTGCGATTTTTAACTACCATATTACTAATTGA 357 0.409 MPEEELVELKFRLYDGSDIGPVRYSPTSTVAMLKDWIFSVWPKDKKINPKAANDIKLISAGKILENNKTVGQCRVPFGELPKGVITMHVVVQPSLVKAKTGRFYSEVYCAIFNYHITN. 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03264 118 CDD Ubl_MUBs_plant 6 93 - -
Seca2g03264 118 ProSiteProfiles Ubiquitin domain profile. 7 75 IPR000626 GO:0005515
Seca2g03264 118 PIRSF MUB 1 107 IPR017000 -
Seca2g03264 118 Gene3D - 1 100 - -
Seca2g03264 118 SUPERFAMILY Ubiquitin-like 2 96 IPR029071 -
Seca2g03264 118 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 100 IPR040015 -
Seca2g03264 118 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 101 IPR039540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03264 Seca-Chr2 99355251 99361371 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03264 - - gmx:100500075 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03264 2 99355251 99361371 Seca2g03264 2 99355251 99361371 ECH