Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03173 ATGGCATGGTCTGCACTGCGCACCCATTCACCTTCTCAACAACTCAAAAACACGCTTCCGAAGCTAACCCGCGCTTCTTCAATGGCTTCCATACCTTTCTCCACTCTCTGCCTCTTTCACAAACCCACTGCTCTCGCCCTCGGCTTCTTAGCTTCGGACCGATTGCGGTTCGGCGGCGGTTCGGCTATCCGGTTCGAGAGGGTTCAGAAGAATCGGAAACTTGGAATCCCCGTTTGCAGAGCTGGTTCCGCCGTTGTCTTCCGAGACCTCGACGCAGACGATTTTCGCCACCCTCTCGATCAACAGAATACGCTGTTGCTGAGAGCAATTCCCGGATTAAATGAATTGGGAAAAGCTCTTCTAGGAACTGTAGCAGAGCAGGTCATGCTCCTTGAGAACATAGGGACATCTGTCCTTGTTTCTGAAAATCAGCTTCCTGATCTTCACCGCTTAATGGTTGAAGCTGCAGAAATATTAAATGTTGATGCCCCTGCTCTATATGTTCGTCAAAGTCCTGTGCCAAATGCATATACATTAGCTATAAGTGGTAAACGACCATTTGTTGTTGTTCATACTAGCCTTGTGGAGCTGCTGACAAGAGCAGAGTTGCAGGTTTTTATATCATATCCATTGCTCTGGTTCCAAAATGTTATTAACTTGCTATCAGTTTACTTTCACAGGCTGTTTTGGCTCATGAGTTGGGTCACCTAA 711 0.4726 MAWSALRTHSPSQQLKNTLPKLTRASSMASIPFSTLCLFHKPTALALGFLASDRLRFGGGSAIRFERVQKNRKLGIPVCRAGSAVVFRDLDADDFRHPLDQQNTLLLRAIPGLNELGKALLGTVAEQVMLLENIGTSVLVSENQLPDLHRLMVEAAEILNVDAPALYVRQSPVPNAYTLAISGKRPFVVVHTSLVELLTRAELQVFISYPLLWFQNVINLLSVYFHRLFWLMSWVT. 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03173 236 Pfam Peptidase family M48 146 204 IPR001915 GO:0004222|GO:0006508
Seca2g03173 236 PANTHER CAAX PRENYL PROTEASE 1 122 209 - -
Seca2g03173 236 Gene3D Metalloproteases ("zincins"), catalytic domain 138 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03173 Seca-Chr2 96438392 96443186 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03173 - - aprc:113862286 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03173 2 96438392 96443186 Seca2g03173 2 96438392 96443186 ECH