Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03166 ATGACTAATAAAAACACATTACCTGTATCAAACTTTGGTAGTGGCTTTTGTTTTGATTACAATAATTCTCCAGAGAAAAAGATGAGAATTGTTGAGTTGTCACCTTCTGATGGAAATGGTTCCTCAGGCTCAGCTGATGAACCTTTACCTCAGGATGCAGATTATAATTTTCAGAGTCTCAGTGATGAGCTAGAGACTTCGATCTTGGCCAGATTTCCAAGATCACAGCACTGGAAATTGTCCTTTCTAAATAGGCGGTTCTGGACTCTAATTAAGAGTGGTGAGATCTACAAAATCAGGAGAGAGTTAGGGTTCAAGGAACCAACTGTGTTTATGTTAGCTAGTGGGGAGAAAAATTGGTGGGGAATGGATTGGCCTTTTAAGTCAAGCAGGAAGCTCCCTCCTATTCAATCAGATTACAACTTTGAGTTTGGAGATAAAGAGTCATTAACTGCAGGGTCCCATCTGTTAGTGTCAGGCAAGGAGATTGATGGAGCTGTTATTTGGAGATATGATTCAGAAACAAATGAATGGCTCAAAGGGCCATCCATGATCAATCCAAGGTGTCTTTTTGCCTCAGCTACTTGTGGTACCTTTGCTTTTGTTGCTGGAGGTCTTGAGACAAATACTTGCAGCCAAATCTTGGATTCTGCTGAGAAATACAATTCACTGAGCCAGACTTGGGAACCCCTCCCAAAGATGAAGCACAGGAGGAAATTTTGCTCAGGTTGCTTCATGGATAACAGATTCTATGTTATTGGAGGGCAAGATGAGAACTACAAGAACCTCACTTGTGGGGAATACTTTGATGCAAAGACAAACAGTTGGAACTTAGTTCCTGACATTTTGAAAGACATTCCCCTTTCAGATTCACAATCTCCACCTCTTATTGCTGTTGCAAATAATGAGCTTTACACTGTTGATGCTTCTTCCAATGAGCTAAAAGTGTATCTCAAGGGAAGCAACTCATGGAAGAAGTTAGGGGTGGTTCCAGTGAGAGCTGATGCTCAAAGAGGTTGGGGTGTGGCATTTAAATCTCTTGGTGATGAGCTACTTGTTATTGGTGCACAGTCTATTTCCCACACAGAACGTGCCATGGCTATGTATACTTGCTTCCCTGATCCTGAGGCTGAGAAATTGCAATGGAGGCAAATTGAATGTGGCAGCATCCAGCTTAATCACTTCATTCGAAACTGTGCTGTGATGGGAACTTGA 1215 0.4189 MTNKNTLPVSNFGSGFCFDYNNSPEKKMRIVELSPSDGNGSSGSADEPLPQDADYNFQSLSDELETSILARFPRSQHWKLSFLNRRFWTLIKSGEIYKIRRELGFKEPTVFMLASGEKNWWGMDWPFKSSRKLPPIQSDYNFEFGDKESLTAGSHLLVSGKEIDGAVIWRYDSETNEWLKGPSMINPRCLFASATCGTFAFVAGGLETNTCSQILDSAEKYNSLSQTWEPLPKMKHRRKFCSGCFMDNRFYVIGGQDENYKNLTCGEYFDAKTNSWNLVPDILKDIPLSDSQSPPLIAVANNELYTVDASSNELKVYLKGSNSWKKLGVVPVRADAQRGWGVAFKSLGDELLVIGAQSISHTERAMAMYTCFPDPEAEKLQWRQIECGSIQLNHFIRNCAVMGT. 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03166 404 FunFam F-box/kelch-repeat protein SKIP11 102 387 - -
Seca2g03166 404 Gene3D - 105 387 IPR015915 GO:0005515
Seca2g03166 404 SMART kelc_smart 201 248 IPR006652 GO:0005515
Seca2g03166 404 SMART kelc_smart 155 198 IPR006652 GO:0005515
Seca2g03166 404 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 54 403 - -
Seca2g03166 404 Pfam Kelch motif 237 281 IPR006652 GO:0005515
Seca2g03166 404 Pfam Kelch motif 187 234 IPR006652 GO:0005515
Seca2g03166 404 SUPERFAMILY Kelch motif 149 360 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03166 Seca-Chr2 96252318 96255225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03166 57 279 Miscellaneous Gene Families AT4G33900 26.471 1.29e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03166 - - gmx:100777338 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03166 2 96252318 96255225 Seca2g03166 2 96252318 96255225 ECH