Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03152 ATGACACTTCGTCTCGTCTCAGCTCCGCCGTCCTTCCCTCGTTTCCACTGCCATGCCACCGCCACTACCACCGTCAGCTCCCAACCTCCGCCTCCGCAAATCTCGCCGGCTACCCCTACTTCTTCAGCTCCACAGCCCCCACCTCTAACGTGCGCACTTCACTGTCCCCACTTCCAATCGTGCTCGGGGTGCACGTACGAGCACAACCTCCACCGTCCGGTTATATTGGACGAAGCTACTAATTTCTTTCAGAAATACGGTGTCTCTGACTTCACATTTGATAGTTGCAAACTGTGGGGTTGGAGGTGCCGTGCGAAATTGGCTGTGCGTGGCTCTTCAACCAACCCTCTTATTGGGCTCTATGAGGAGGGTACTCATAACGTAATTGACATTCCAGAGTGCAAAGCTCATCATCCTAATATTAATGCTGCCGTGGAGCTTCTTAGACAAGGTATTACTGAATTAGATGTTGAGCCATATCTTGAAGATGAAGGTACTGGAAATTTGCGATACGTTCAGATGGCTGTGACAACATACAACACGTCTCTTCCTGCAGCACAAAGATATAAGAATGGAAAGGTTCAGGTTACATTGGTTTGGAATTCAAGAAATGAAAATTCACCCAGTTCAGACAAACTGAATGCACTGGCAAATTTTCTATGGAAAAATGGTGGGCCACGGAGCAGGCTTCATTTAATTCACTCTGTGTGGGCCAACTTTCAGACTTCTACTAACAATGTCATTTTTGGGAATAGATGGAGACATATTCTTGGAGAAAGAGATTTTTGGGAACATGTTGGTGGAATTGACGTGTTGTTGGCCCCTTCTAGTTTTGGCCAGGCAAACACACGGGCTTTTGATTCCTTGCTGCAGAAGTTACACAAATATGTTCCTCATGAATCATCTGTTGCTGATTTGTATGCTGGAGCTGGGGTCATTGGGTTATCATTAGCTGCCGCTAGAAAGTGCAGATCCATTAAATGCATTGAGATTAACAAAGAGTCGAAGGTATCTTTTGAGAAGACTATTGAACGTTTGCCTGCCACCGTTGACAGCAGCATCAGTTGGCACCATGCAGATGCTTCAAAAGATCCCTTTTTGTGGCTTGTTGGCTCAGATGTTGTTGTCGTTGATCCTCCTAGGAAAGGACTAGATGTATCTCTTATTGATGCATTGAAGAATATATCATCAATTGAGCGTAAAGTCTTGTCATCATCTGAACGGTTGTTCCTTTTGTAA 1239 0.4536 MTLRLVSAPPSFPRFHCHATATTTVSSQPPPPQISPATPTSSAPQPPPLTCALHCPHFQSCSGCTYEHNLHRPVILDEATNFFQKYGVSDFTFDSCKLWGWRCRAKLAVRGSSTNPLIGLYEEGTHNVIDIPECKAHHPNINAAVELLRQGITELDVEPYLEDEGTGNLRYVQMAVTTYNTSLPAAQRYKNGKVQVTLVWNSRNENSPSSDKLNALANFLWKNGGPRSRLHLIHSVWANFQTSTNNVIFGNRWRHILGERDFWEHVGGIDVLLAPSSFGQANTRAFDSLLQKLHKYVPHESSVADLYAGAGVIGLSLAAARKCRSIKCIEINKESKVSFEKTIERLPATVDSSISWHHADASKDPFLWLVGSDVVVVDPPRKGLDVSLIDALKNISSIERKVLSSSERLFLL. 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03152 412 MobiDBLite consensus disorder prediction 22 45 - -
Seca2g03152 412 MobiDBLite consensus disorder prediction 29 45 - -
Seca2g03152 412 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 53 396 IPR029063 -
Seca2g03152 412 CDD AdoMet_MTases 303 395 - -
Seca2g03152 412 Gene3D - 102 279 - -
Seca2g03152 412 PANTHER BNAA06G32370D PROTEIN 35 407 - -
Seca2g03152 412 ProSiteProfiles SAM-dependent methyltransferase RNA m(5)U-type domain profile. 1 412 IPR010280 GO:0006396|GO:0008173
Seca2g03152 412 Pfam Methyltransferase small domain 289 381 IPR007848 GO:0008168
Seca2g03152 412 Gene3D Vaccinia Virus protein VP39 93 396 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03152 Seca-Chr2 95244340 95260759 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03152 - - gmx:100816889 707.983