Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03130 ATGAAAGGAAAGAACCGGAGAAGTGGTGGTGCTGTTCAAATGGATTACCTGATTCACATACACGAGATTAAGCCTTGGCCCCCATCACAATCTCTCAGATCCTTTCGTTCTGTATTGATACACTGGGAGAATGGTGAACGTTCTTCAGGATCTACCAATCTTGTTTCCCCTTCACTTGGTTCTAACGCAGGTGAAGGAAAAATTGAGTTTAATGAGTCATTTAAGCTTCCTGTTACTCTGTTGAGGGATATGTCTGTCAAAAATGCTGATGCTGAAGTGTTCCAAAAGAATTACTTGGAGTTCAACTTGTATGAGCCTCGAAGAGATAAGATTGTTAAAGGTCAGTTGCTGGGGACTGCCATTGTAGACTTGGCAGATTATGGCATCCTTAAAGAGACCTTGAGCATTAGTGCACCATTGAACTGCAAGAGGAACTACAGGAACATGGACCAACCACTTTTGTTCATTAAAATTGAGCCTGTTGAAAAGAATCGTGCTAAGTCCTCATTGAAGGAAAGATTGTCAAAAGACAATAACGGCAGTGACTCTGTATCAGCATTGATGAATGGAGAATATGCTGATGGAGCTGAGGTTGCCTCTTTTACAGATGATGATGTTTCCTCTCATTCATCTGTGGCAGCAGCTACTACTTCCCCTGAGTCAAGCGGGTGTATGCCTCCTGAACATGAAGAGAACGGACCAGCTCAAAACACCGGTAGTAATAACAAGGAGCATCCCTTGTCTTCAGAAACAAGGGTTGAAAATTTGAATATGTTGCAGCAAGATAAGAATGAGATGCTGGAGAGGAGTTCATCCTATGTGTCATGTATGGATGTATCCTCTGATCTTGGAAGTCCAGTAAATAGTCATACTTCTATGATGAGCTCTCCCAATCATGGTTGGGCGACAACCCAAAAGCAAGTTGTTCTCCCAAGTGCTGATTCTTCTTCCCCATCCTTAGAAGAAAATTCTATGCGCAGGTCCAGAAGCAGTGATCATGAAAGTTTGGATCAGGAAGTTCATAAAAAAGTTGTTAATTGTAGAAATATAATTACACATGTTCAAACAAATAGTGATGAAAGTGCTTATTCAAGCAACACCACATCTCTAGATTGCTTTGTGGACAAGAATCCAGGCTCTGGGAACTGTGGTGATTTGGAAATCAACGACAAATTAAGTGAGAGATGTGAGGAATCTGACAAATTTAGTGTGAAGGAGGGGGGAAGTGATAAATATTACTCTAATTCCGGTGAGGACAAGCTTGGAAATGGATTGTCTCATTTTGATAAGCAAAACCATGTAGAAGATGAATCAGTGGCTCAAGATGCCATAGAACAAGTTTTATTAAGTAGTGGTATGTATTCTCTAGGTGGCTCAGATATCGGTATGAAAGGTAATATTTTGAAAAGTGAAATATTAAAGCCTGTAAAGTCTGTAAGGTCATCAGCAGACTCAGTTAAGAGTATTGGGTCACTTGGTAACAATCATCATGCTGAAGTAAAGGAAAATGGCATTAATGGAGATGCCCAAAATAGTGGAGGGAATATCAGAAGCAGTGACAAGAAAGATGCTAAGATTTATCCAAGGGAAGCCAGGAATACCATTTTAGACAGCAAGATTGAGCATTTGGAAAACAAGATAAAGATGCTTGAAGGAGAATTAAGAGAAGCTGCTGCAATTGAGGCTTCTTTATATTCAGTAGTTGCTGAGCATGGAAGTTCCATGAATAAGGTTCATGCCCCAGCTCGGCGCCTTTCCAGGTTGTACCTTCATGCTTGTAAAGAAAATATTCAAGCAAGAAGATCTGGGGCAGCTAAAAGTGCTGTTTCTGGATTAGCACTTGTTGCGAAGGCATGTGGAAATGATGTCCCAAGGTTAACATTTTGGCTATCTAATTCTATTGTTTTGAGAGCAATTATAAGCCAAACTACCAAAGATATGGCACCATCCAATCCTGCCGGATCTAGTACAAGAAGGAAGAGTGGAGAGGGGAATGGCAAGATAGTACAACCATTAATATGGAAGGGGTTCTCTCCTAGGAAAAGCGAAAATACAGCAGTTGAGTATGGAGGTCTTGGTAACTGGAATGACCCAAACGTGTTCACATCAGCGCTGGAAAAGGTGGAAGCTTGGATCTTCTCTCGCATCGTGGAATCTATTTGGTGGCAGTCTCTGACTCCACATATGCAGCTCATTGATGCAAAGGTCACTCACAAGGATATGGGTTCTCCCTTGAGGAAAAGCTATAAAAAGATGTCTAGCTCATGTGATCAAGGAAATTTATCGCTAGATATTTGGAAGAATGCTTTTAGAGAAGCCTGTGAAAGGATCTGTCCTATCCGAGCTGGAGGGCATGAGTGTGGCTGTTTGTCTGTGCTGCCTCGTTTGATTATGGAGCAGTGCGTAGCGAGATTAGATGTTGCTATGTTCAATGCCATTCTTCGTGAATCTGCTGATGACATTCCATCTGACCCTGTATCTGATCCCATTAGTGATCCCAAGGTTCTCCCCATTCCACCTGGTAAATCAAGCTTTGGAGCCGGTGCACAGCTAAAAACGGCGATTGGTAACTGGTCTAGATGGCTGACTGACCTATTTGGTATGGATGATGATGACTCACTTGAGGATAGAGATGATGACAATGATGGAAGTGAAAATACATCCTTCAAGTCCTTCCATCTTCTTAGTGCACTCAGTGATCTCTTGATGCTTCCTAAGGACATGCTGTTAAGTGCATCCATCAGGAAAGAGGTCTTCCCAATGTTTAGTGCATCAATAATCAAGAAGATTCTAGACAATTTTGTCCCAGATGAGTTTTGCCCTGACCCAATTCCGAGTGATGTGTTTGACGCTCTGGACTCGCAGGATGATCTTGAGGATAGAAAGGAGTCTGTCAACAATTTCCCATGCATTGCAGCTCCCATTGTATATATGCCTCCACCAGCAACAACCATTGCAAGCATTATTGGAGATATTGGAAGCAAATCTCAGCTCAGAAGAAGCAGATCTTCTGTTGTCAGGAAGTCATACACCAGTGATGATGAGCTCGATGAATTAAATTCACCGTTGTCTTCAATATTTGGTAGTGGATCCTCCTCACCAGCATCAATAAAACCCAACTGGAAGTTGAAAGAAAGTCGCACTGAATCTTCTGTTAGATATGAACTTCTAAGGAATGTTTGGATGAACAGCGAGTGA 3198 0.4181 MKGKNRRSGGAVQMDYLIHIHEIKPWPPSQSLRSFRSVLIHWENGERSSGSTNLVSPSLGSNAGEGKIEFNESFKLPVTLLRDMSVKNADAEVFQKNYLEFNLYEPRRDKIVKGQLLGTAIVDLADYGILKETLSISAPLNCKRNYRNMDQPLLFIKIEPVEKNRAKSSLKERLSKDNNGSDSVSALMNGEYADGAEVASFTDDDVSSHSSVAAATTSPESSGCMPPEHEENGPAQNTGSNNKEHPLSSETRVENLNMLQQDKNEMLERSSSYVSCMDVSSDLGSPVNSHTSMMSSPNHGWATTQKQVVLPSADSSSPSLEENSMRRSRSSDHESLDQEVHKKVVNCRNIITHVQTNSDESAYSSNTTSLDCFVDKNPGSGNCGDLEINDKLSERCEESDKFSVKEGGSDKYYSNSGEDKLGNGLSHFDKQNHVEDESVAQDAIEQVLLSSGMYSLGGSDIGMKGNILKSEILKPVKSVRSSADSVKSIGSLGNNHHAEVKENGINGDAQNSGGNIRSSDKKDAKIYPREARNTILDSKIEHLENKIKMLEGELREAAAIEASLYSVVAEHGSSMNKVHAPARRLSRLYLHACKENIQARRSGAAKSAVSGLALVAKACGNDVPRLTFWLSNSIVLRAIISQTTKDMAPSNPAGSSTRRKSGEGNGKIVQPLIWKGFSPRKSENTAVEYGGLGNWNDPNVFTSALEKVEAWIFSRIVESIWWQSLTPHMQLIDAKVTHKDMGSPLRKSYKKMSSSCDQGNLSLDIWKNAFREACERICPIRAGGHECGCLSVLPRLIMEQCVARLDVAMFNAILRESADDIPSDPVSDPISDPKVLPIPPGKSSFGAGAQLKTAIGNWSRWLTDLFGMDDDDSLEDRDDDNDGSENTSFKSFHLLSALSDLLMLPKDMLLSASIRKEVFPMFSASIIKKILDNFVPDEFCPDPIPSDVFDALDSQDDLEDRKESVNNFPCIAAPIVYMPPPATTIASIIGDIGSKSQLRRSRSSVVRKSYTSDDELDELNSPLSSIFGSGSSSPASIKPNWKLKESRTESSVRYELLRNVWMNSE. 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03130 1065 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 12 141 IPR019448 -
Seca2g03130 1065 MobiDBLite consensus disorder prediction 202 248 - -
Seca2g03130 1065 MobiDBLite consensus disorder prediction 203 223 - -
Seca2g03130 1065 ProSiteProfiles C2 NT-type domain profile. 4 162 IPR019448 -
Seca2g03130 1065 MobiDBLite consensus disorder prediction 308 324 - -
Seca2g03130 1065 Coils Coil 533 560 - -
Seca2g03130 1065 MobiDBLite consensus disorder prediction 308 341 - -
Seca2g03130 1065 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 534 1062 IPR021827 GO:0005643
Seca2g03130 1065 MobiDBLite consensus disorder prediction 325 341 - -
Seca2g03130 1065 MobiDBLite consensus disorder prediction 646 665 - -
Seca2g03130 1065 MobiDBLite consensus disorder prediction 233 248 - -
Seca2g03130 1065 MobiDBLite consensus disorder prediction 502 524 - -
Seca2g03130 1065 MobiDBLite consensus disorder prediction 646 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03130 Seca-Chr2 94004761 94017190 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03130 - - gmx:100783487 1588.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03130 2 94004761 94017190 Seca2g03130 2 94004761 94017190 ECH
Seca2g03130 2 94004761 94017190 Seca2g03130 2 94004761 94017190 PCT