Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03110 ATGGACATCCTCTTCGCCCAGATCCAAGCGGACCTCCGCTCCAACGACGCGCTCCGCCAGTCCGGCGCCCTGCTGCAGGCCCTCCAGCAGTCGGCAGCGGGTCGCGACATCGCGGTGATCGCTAAATCCGCGGTGGAAGAGATCGTGGCGGCGCCAGCCTCCGCAGTGTGCAAGAAGCTAGCATTCGACCTAATCCGCTCCACGCGCCTAACCCCCGACCTGTGGGACACCGTCTGTAGTGGTATCCGCAACGACTTCCACTTCCCTGACCCTGACGTCACTGCTGCTGCTGTGTCCATCCTTGCCGCGATCCCTTCCTACCGCCTCGCGAAGCTGATCGCTGAATGCAACAAGGAAATCTCCGATTGCTTCGATTCCCCAAGCGATAATCTCCGCTTCTCCATAACCGAAACCCTTGGTTGCGTCCTCGCCCGCGATGACCTCGTCACGCTCTGCGAAAACAACGTGAACCTCCTCGACAGGGTCTCCGGTTGGTGGGCCCGCATTGGCGCCAACATGCTGGACCGATCCGACGCCGTTTCGAAGGTCGCGTTTGAATCCGTCGGCCGGCTCTTCCAGGAGTTCACCACAAAGCGGATGAGCAAGCTCGCCGGTGACAAGCTCGTGGATAGTGAGAACTCACTCGCCATTCGATCCAATTGGGTTTCCTCAATGGTTGACTTCGTCTGGAAGAAGCGCAGCGCCCTCATGGCCCGGTCCTTGATCTTGCCTGTTGAGAATTTTCGTACCACCGTGTTTCCGATCGTATATTCCGTCAAGGCTGTTGCCTCCGGCAGCGTAGAGGTTATTCGGAAGCTGTCCAAGTCTTCTAACAGCGGAGGCAGTGAGGTTGATTCCAATGCGGAGAAGTTGGTGGGTGTTTCGGATGTGGTTACTCACTTGGCACCCTTCTTAGTTTCGTCGTTGGAACCGGCATTGATTTATGAAGTGGGGATTAACATGCTGTATCTGGCTGATGTACCTGGAGGGAAGACTGAATGGGCATCGCAATCCATCATTGCTATTCTCACACTATGGGATAGGCAGGAATTTGCTTCTGCTAGAGAGAGTATTGTTAGGGCTGTTGTTACCAATCTTCATCTCCTTGATCTTAACATGCAGGTATCACTGTTCAAGAGACTGCTTTTAATGGTGAGAAACCTGAGAGCAGAATCTGATCGCATGCATGCTTTAGCATGTATATGTAGAACAGCTCTTTGTGTGGACCTATTTGCCAAGGAAAGTGTCCGACGAGGGCAGAAACCTGTTGCCGGAACTGATATTGCTTCCCTTTTTGAGGATGCGAGAGTGAATGATGATCTTAATAGCATAACAAGTAAAAGCATATTTAGGGAGGAGTTAGTTGCATCACTAGTGGAAAGTTGCTTTCAGTTGTCCCTGCCTTTGCCTGAACAAAAAAACTCGGGCATGGAGAGCAGGGTTATTGGAGCTTTGGCATATGGAACTGGTTATGGTGCATTAAACTGGACTGAACCTTCTTTGGAAGTGGTGGAAGTTTGTCGACCTTGTGTTAAATGGGATTGTGATGGCCGCACCTATGCAATTGACTGCTACTTGAAGTTGCTCGTTAGACTATGCTACATATATGATACTAGGGGTGGTGTAAAAAGAGTCAAAGATGGAGCATCTCAGGACCAAATTTTGAACGAGACTAGATTGCAAAACTTGCAACGTGAACTTGTGAGGGACTTACGTGAGGTCAATACACCTAGAATATTGGCCCGCCTTATATGGGCTATTGCAGAGCACATAGATATAGAAGGATTGGATCCACTCCTAGCAGACGACCCAGATGATCCTCTTAATGTCATTGTATCAAATATTCACAAGGTTCTTTTCAATGTTGATTCGACTGCAGAAACAACAAATAGAGTTCAAGATGTACAGGCAGTTCTTATATCTGCTCAACGATTGGGATCGCGCCACCCTAGGGCTGGGCAGTTGCTTACAAAAGAGCTTGAAGAGTTTAGGAACAATCCTTTGGCTGATTCTGTTAGCAAGCATCAATGCCGATTGATATTGCAAAGAATCAAATATGCTTCAAGTCATCATGAGAGTAGGTGGGCAGGGGTTACAGCAGCCAGAGGGGATTACCCATTTAGCCACCATAAATTAACTGTTCAATTTTATGAAGCTTCTGCTGCTCAGGATAGAAAGTTGGAAGGATTGGTTCACAAGGCTATTTTAGAGCTATGGAGACCAGACCCCAGTGAACTAACCCTTTTGCTGACAAAAGGACTTGATTCTACTTTACTGAAGGTTCCTCCTACTGCAATTACTTTAACTGGAAGCAGTGATCCCTGCTATGTTGAAGGTTATCATTTAGCAGACTCAAGTGATGGGAGGATCACTCTGCATTTAAAGGTCTTAAACTTAACTGAGCTCGAGTTAAATCGGGTGGATGTACGTGTGGGATTATCAGGTGCATTATATTATATGGATGGTTCTTCTCAAGCAGTGCGGCAACTGCGTAATCTTGTTTCACAGGATCCAGTGCTGTGCAGTGTGACGGTTGGTGTTTCTCACTTTGAAAGATGTGCCCTTTGGGTTCAAGTGTTGTATTACCCATTCTATGGTAGTGGTGCTGTTGGAGACTATGAAGGTGACTATGCTGAAGAGGATCCTCAAATCATGAGACAGAAGAGGAGCTTAAGGCCCGAATTAGGTGAACCTGTAATTTTGAGATGTCAACCTTATAAAATTCCATTGACTGAGCTTCTTTTGCCACACCAAATATCACCTGTTGAGTTTTTTCGACTGTGGCCCAGTTTGCCAGCTGTTGTAGAATACACTGGTACATATACATATGAAGGAAGTGGCTTTAAGGCTACTGCAGCCCAACAGTATGGTGCATCTCCTTTCTTAAGTGGACTGAAATCCTTGTCTTCCAAGCCATTCCACAAAGTTTGTTCACATATTATCCGCACAGTGGCAGGGTTTCAGTTGTGTTATGCTGCTAAAACATGGCATGGTGGCTTCTTGGGCATGATGATTTTTGGTGCCAGTGAAGTGAGTAGAAATGTGGATTTGGGTGATGAGACGACAACCATGATGTGCAAGTTTGTGGTACGAGCATCTGATGCATCTATTACTAAGGAAATTGGATCAGATCTTCAGGGCTGGTTGGACGACCTTACTGATGGCGGCGTGGAGTATATGCCAGAAGATGAAGTGAAAATAGCTGCTGCCGAGAGGCTTAGGATATCAATGGAAAGGATAGCCTTGTTGAAGGCAGCCCAACCACGACCCAAGACTCCAAAATCCGATGAAGATGAAGATGAGGAGGATGAAGACAAAATCAAAGAAAAGGATGGGGATGAAGATGAGAAAAAGAAGGGACCTTCAACTCTGTCGAAATTGACTGCTGAGGAGGCTGAGCATCAAGCTCTTCAAGCAGCAGTGCTACAGGAGTGGCATATGCTCTGCAAGGATAGAAGCACTGAAGTCAACTAA 3474 0.4744 MDILFAQIQADLRSNDALRQSGALLQALQQSAAGRDIAVIAKSAVEEIVAAPASAVCKKLAFDLIRSTRLTPDLWDTVCSGIRNDFHFPDPDVTAAAVSILAAIPSYRLAKLIAECNKEISDCFDSPSDNLRFSITETLGCVLARDDLVTLCENNVNLLDRVSGWWARIGANMLDRSDAVSKVAFESVGRLFQEFTTKRMSKLAGDKLVDSENSLAIRSNWVSSMVDFVWKKRSALMARSLILPVENFRTTVFPIVYSVKAVASGSVEVIRKLSKSSNSGGSEVDSNAEKLVGVSDVVTHLAPFLVSSLEPALIYEVGINMLYLADVPGGKTEWASQSIIAILTLWDRQEFASARESIVRAVVTNLHLLDLNMQVSLFKRLLLMVRNLRAESDRMHALACICRTALCVDLFAKESVRRGQKPVAGTDIASLFEDARVNDDLNSITSKSIFREELVASLVESCFQLSLPLPEQKNSGMESRVIGALAYGTGYGALNWTEPSLEVVEVCRPCVKWDCDGRTYAIDCYLKLLVRLCYIYDTRGGVKRVKDGASQDQILNETRLQNLQRELVRDLREVNTPRILARLIWAIAEHIDIEGLDPLLADDPDDPLNVIVSNIHKVLFNVDSTAETTNRVQDVQAVLISAQRLGSRHPRAGQLLTKELEEFRNNPLADSVSKHQCRLILQRIKYASSHHESRWAGVTAARGDYPFSHHKLTVQFYEASAAQDRKLEGLVHKAILELWRPDPSELTLLLTKGLDSTLLKVPPTAITLTGSSDPCYVEGYHLADSSDGRITLHLKVLNLTELELNRVDVRVGLSGALYYMDGSSQAVRQLRNLVSQDPVLCSVTVGVSHFERCALWVQVLYYPFYGSGAVGDYEGDYAEEDPQIMRQKRSLRPELGEPVILRCQPYKIPLTELLLPHQISPVEFFRLWPSLPAVVEYTGTYTYEGSGFKATAAQQYGASPFLSGLKSLSSKPFHKVCSHIIRTVAGFQLCYAAKTWHGGFLGMMIFGASEVSRNVDLGDETTTMMCKFVVRASDASITKEIGSDLQGWLDDLTDGGVEYMPEDEVKIAAAERLRISMERIALLKAAQPRPKTPKSDEDEDEEDEDKIKEKDGDEDEKKKGPSTLSKLTAEEAEHQALQAAVLQEWHMLCKDRSTEVN. 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03110 1157 MobiDBLite consensus disorder prediction 1110 1124 - -
Seca2g03110 1157 PANTHER TSET COMPLEX MEMBER TSTA 1 1156 IPR037501 GO:0006897
Seca2g03110 1157 SUPERFAMILY ARM repeat 4 616 IPR016024 -
Seca2g03110 1157 Gene3D - 4 407 IPR011989 -
Seca2g03110 1157 MobiDBLite consensus disorder prediction 1084 1131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03110 Seca-Chr2 93217599 93228309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03110 1 836 EF-hand Containing Proteins AT3G01780 85.119 0.0 1451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03110 - - gmx:100781324 2101.25