Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03044 ATGCCTCTTAGATATTTCCCTCTTCGATGGGAGAGCACCGGGAATCAATGGTGGTATGCCTCCCCCATAGATTGTGCTGCCGCTAATGGCCACTATGACTTGGTTCGTGAGTTGCTTAGAATTGACAACAACCATCTCTTCAAGCTCACATCACTGCGCCGAATCCGTCGCCTTGAACTTGTTTGGGATGATGAAGAACAGTTCAATGGTGTTGCAAAGTGTCGTTCTGAAGTGGCACAAAAGCTTCTTCTTGAGTGTGAATCAAAGAGAGGGAAGAACTCTCTTATCCGTGCTGGTTATGGTGGGTGGCTAATGTACACTGCTGCATCAGCAGGGGACTTGGGTTTTGTTCAACAGCTTCTTGAGAGGAATCCTTTGTTGGTGTTTGGAGAAGGAGAGTATAATGTCACTGATATTTTTTATGCTGCTTCAAGAAGCAAGAATTGTGAGGTTTTCAAGATGCTATTTGATTTTGCAGTTTCACCAAGGTTTGTCACAGGCAAAGGTGGGATTTTGGAGGAGCAAATTGGGGATATTCCTTCTGTTTACAAGTGGGAGATGACTAGCAGAGCTGTCCATGCTGCTGCTAGAGGAGGTAATGTAGAGATTTTGGAGAAGCTTCTTGCTAATTGCTCTGATGTTTTGGCTTATAGAGATACTCAGGGCTCTACTATCTTGCATTCTGCTGCTGGCAGAGGGCAGGTTGAGGTGATCAAATATCTCACATCATCCTTTGACATTATCAACTCCACAGACCATCAGGGAAACACTGCTTTGCATGTGGCTGCTTACAGAGGCCAGTTAGCTGCAGTTGAAACTCTTGTTTCTGCGTCTCCTGCATTAATTACTCTGAGAAACAACACAGGAGAAACTTTTCTCCATAAGGCTGTGTCTGGTTTTCAGTCTCCTGCATTCCGAAGATTGGACAGACAGGTTGAGCTATTAAGGAAGTTAATAAGTGACAAAAAATTTCACAAAGAGGAAATCATCAATGAAAAGAACAGTGATGGAAGAACTGCTCTTCACATTGCCACAATGGGAAACATTCACAGTGATCTTGTGAAACTTCTTATGACTGCTCCATTGATAAATCTGAATGTTAGTGATGCTAATGGCATGACCCCACTTGATTACCTTAGGCAAAGTCCCAATTCTGCAATATCAGGCGTACTAATTAGGAAATTGATCTCAGCTGGGGGAATGTTCCATTATCATGGTTACAATTCAAGAAAAGCCATAGCTTCACAAATGAAAATGCATCATAGTATGTGTAGCAGTCCTGGAACATCATTTAGAATCACAGACACTCAAATGTTTTTGTACACAGGAATTGAGAATGCATCAGATGCTAGTACTGATCAGGGAAGTGTAGGAATGAGTTCAGCTTCATCAGATCACAGTCCATATGACTCTGCAGCAGAGAATAGACCCTCAACCACAAGCAAAAGGACTAGTGCTATAAACAATGCAGCAGCAGGGTTGAAAAGAGTCCTTCAGTGGCCTCTGTTGAAGGACAAGAAAGCTGAGGAGAGGTACAAGAAATCAATGGATGATGGTTCAGTGGACTCATGCAGGAAATGGAACTGCTCAGATGAAACTCCAACCTCACTTAGACAAAGATTTTTTAGGCATTCTGCACTTCCTAACAACAAAAGGAGTCTTTGTGTGAGGAGTTACCAATCAAGTCCAAATGCTAAGAAGAGATTTGCTTCAGGATTGGTGCATGGAGATATGCAGTCTATGCCACAAATAAAGGTTGCAGGAAGATCTCGCTCTAGTTCTTTTTCTATATCATCATTTTCTTCACCTAGATCAATAGATAAGCAAAAGGGTATTTGCATTGATATTGATAATGTTGCTAGACCATCTTGCTCAAGTCATCTACATGATGGTGAATCACCAAATTCTGGAAAGCGAGCTTCTGTTAGTAAAAAGCTAAGGGGCCATTACTTATGTTTTGGTGAACCAAACCTTGATGTGAAAAACTCAGTAAACAAGAAGCAAGAAAGCCAGAGTTACAAGGATCCTGTTGTTTCAGTTGCTTAA 2046 0.4184 MPLRYFPLRWESTGNQWWYASPIDCAAANGHYDLVRELLRIDNNHLFKLTSLRRIRRLELVWDDEEQFNGVAKCRSEVAQKLLLECESKRGKNSLIRAGYGGWLMYTAASAGDLGFVQQLLERNPLLVFGEGEYNVTDIFYAASRSKNCEVFKMLFDFAVSPRFVTGKGGILEEQIGDIPSVYKWEMTSRAVHAAARGGNVEILEKLLANCSDVLAYRDTQGSTILHSAAGRGQVEVIKYLTSSFDIINSTDHQGNTALHVAAYRGQLAAVETLVSASPALITLRNNTGETFLHKAVSGFQSPAFRRLDRQVELLRKLISDKKFHKEEIINEKNSDGRTALHIATMGNIHSDLVKLLMTAPLINLNVSDANGMTPLDYLRQSPNSAISGVLIRKLISAGGMFHYHGYNSRKAIASQMKMHHSMCSSPGTSFRITDTQMFLYTGIENASDASTDQGSVGMSSASSDHSPYDSAAENRPSTTSKRTSAINNAAAGLKRVLQWPLLKDKKAEERYKKSMDDGSVDSCRKWNCSDETPTSLRQRFFRHSALPNNKRSLCVRSYQSSPNAKKRFASGLVHGDMQSMPQIKVAGRSRSSSFSISSFSSPRSIDKQKGICIDIDNVARPSCSSHLHDGESPNSGKRASVSKKLRGHYLCFGEPNLDVKNSVNKKQESQSYKDPVVSVA. 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03044 681 ProSiteProfiles Ankyrin repeat profile. 254 276 IPR002110 GO:0005515
Seca2g03044 681 SUPERFAMILY Ankyrin repeat 96 378 IPR036770 -
Seca2g03044 681 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 5 394 - -
Seca2g03044 681 SMART ANK_2a 254 284 IPR002110 GO:0005515
Seca2g03044 681 SMART ANK_2a 221 250 IPR002110 GO:0005515
Seca2g03044 681 SMART ANK_2a 336 367 IPR002110 GO:0005515
Seca2g03044 681 SMART ANK_2a 134 164 IPR002110 GO:0005515
Seca2g03044 681 SMART ANK_2a 371 404 IPR002110 GO:0005515
Seca2g03044 681 SMART ANK_2a 288 326 IPR002110 GO:0005515
Seca2g03044 681 SMART ANK_2a 18 47 IPR002110 GO:0005515
Seca2g03044 681 SMART ANK_2a 100 129 IPR002110 GO:0005515
Seca2g03044 681 SMART ANK_2a 187 216 IPR002110 GO:0005515
Seca2g03044 681 ProSiteProfiles Ankyrin repeat region circular profile. 221 241 - -
Seca2g03044 681 ProSiteProfiles Ankyrin repeat region circular profile. 254 276 - -
Seca2g03044 681 Pfam Ankyrin repeats (many copies) 223 275 IPR002110 GO:0005515
Seca2g03044 681 Pfam Ankyrin repeats (many copies) 291 357 IPR002110 GO:0005515
Seca2g03044 681 MobiDBLite consensus disorder prediction 451 484 - -
Seca2g03044 681 Gene3D - 11 420 IPR036770 -
Seca2g03044 681 ProSiteProfiles Ankyrin repeat profile. 221 253 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03044 Seca-Chr2 91044848 91047627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03044 193 391 Miscellaneous Gene Families AT5G60070 33.654 1.17e-16 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03044 - - gmx:100816987 1037.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03044 2 91044848 91047627 Seca2g03044 2 91044848 91047627 ECH