Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01821 ATGGCTCGTGGTCAAGGGTCAACGAACCTATGTTGCATCTTCTTCCAAGATGAACCTTCACCATCAGAGACCCTCGGCATTCTCGCTTTCGATTCCGCCAAGACCATGTGCCGCCTCGTCTCCCTTTACAAGTCCCTAACCGACGTTGAAATCCACAAGCTTCGCCGCCACGTCATCAAATCCAAAGGTGTGGCCCACCTCAATTCCCAAGACGAATCCTTCCTCCTCACCCTCGCTTGCGCCGAGCGTCTCGAGGATCTCAACCTCGCCGCCGCCGCAACCTCCCGCCTCGGCCGCCAATGTTCCGATAACGGACTCTTCCACTTCGACGCTGTCTTTTCCGCCGTGAAAGGCGGAACCATCGACATCAGGAAACTCGAGTTCGCCACGCGCAACGTGGATAAGATAATTGAGAAGATGGAGAAGCTCGTGTTCGCGACGAGGAACCTTCATAAGGCAATGGAATCGTTAACGGAGATGGAAGGTTCGGAGAAGAAGATCCAACGGTGGAGAAATATTAGAGCCAATCACGGCCTTAAGGTGAAGGTTGAATGTTATAAAGATAGGATCGAGTTTTATAAAAGGCAGGTGCAATATTACAAGCAAACGTCGCTTTGGAATGAGACGTTTGATAAGGTCGTTGGGTTAATGGCGAGGATCATCTGCATTGTTTACGCTAGAATATGCTTCGTTTTTGGATCATTGGTTACCGGCATGTCCGGTTGCAGCAGCAACAAGAACAATGCCGTTAGGGGTGTTTTCACACCGAATTTTGAAAACTCTTGTTGCCGAATTGAGCATAGGGATTTGTATTCAATAAACCTTTGTCTCTTGGAGCAGGATGAGGAATCTTTGAAGAGGCGCGTGAGGAACACGAGTTATGTTTTGAAGAGCACCAGAACGGGTATGATTCGGTTCCCCAACCAGGCTCCTCCGTCGCCGCACGGCGGCGAAGGAGGCAGTTGTGGCGGCGGGGATAAAGCAAAGAACAACAGGGTTATGCGGCTGGCGCCGCCGTCGACGGTGGGAGGGGCGGGGCTTTCGTTGAGGTATGCGAGTGTGATATTGTTTATGGACAGGTGTATCCATGCTGCAGCGGCGATTGGGAAGGACGCGCGCGTGGCGTTGTATGAGTTGTTGCCCGGGAGGTTGAAGGGGAAGTTGACGGGGAAATTGAGGAAGCAGTGGTTGAAGTGGGAGGAGAGTTTAGAGGGAGAGGAGGAGGGAAATTCGGCGGTGGCGGAGCAGTGGCATGAGACGATGGAGGAGGTGATGGAATGGTTGTTGCCGGTGGCGCATAACACGGTGAGGTGGCAAGCGGAAAGGAACCTAGAGAAGCAGAAGTTTGAGACTAGGCCAACGGTGTTGTTGTTGCAAACGTTGCATTACTCGGATTTAGAGAAGGTGGAGGAAGCAATTGTGGAGGTGTTGATTGGGTTGAGTTATATGTATTGGAGCCATAAACAATGGTAG 1473 0.516 MARGQGSTNLCCIFFQDEPSPSETLGILAFDSAKTMCRLVSLYKSLTDVEIHKLRRHVIKSKGVAHLNSQDESFLLTLACAERLEDLNLAAAATSRLGRQCSDNGLFHFDAVFSAVKGGTIDIRKLEFATRNVDKIIEKMEKLVFATRNLHKAMESLTEMEGSEKKIQRWRNIRANHGLKVKVECYKDRIEFYKRQVQYYKQTSLWNETFDKVVGLMARIICIVYARICFVFGSLVTGMSGCSSNKNNAVRGVFTPNFENSCCRIEHRDLYSINLCLLEQDEESLKRRVRNTSYVLKSTRTGMIRFPNQAPPSPHGGEGGSCGGGDKAKNNRVMRLAPPSTVGGAGLSLRYASVILFMDRCIHAAAAIGKDARVALYELLPGRLKGKLTGKLRKQWLKWEESLEGEEEGNSAVAEQWHETMEEVMEWLLPVAHNTVRWQAERNLEKQKFETRPTVLLLQTLHYSDLEKVEEAIVEVLIGLSYMYWSHKQW. 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01821 490 MobiDBLite consensus disorder prediction 305 330 - -
Seca2g01821 490 PANTHER BNAC09G50660D PROTEIN 23 489 - -
Seca2g01821 490 Pfam Domain of unknown function (DUF3475) 27 82 IPR021864 GO:0045927
Seca2g01821 490 Pfam Protein of unknown function (DUF668) 341 437 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01821 Seca-Chr2 35539966 35541438 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01821 - - aprc:113862407 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g01821 2 35539966 35541438 Seca2g01821 2 35539966 35541438 ECH