Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01774 ATGGCTAACGACATCCGATTCTTCGAGCTGAACACAGGTTCTAAGATCCCTTCCGTTGGCTTAGGAACTTGGCAGGCCGATCATGATGTCGTCAGTGATTCTATTGCTACTGCCATCAAGGTTGTTGGTTACCGCCATATTGATTGTGCTCAATTCTATGGCAATCAGAAACAGATTGGCTTAACATTAAAGAAGTTATTTGAGGAAGGTGTAGTTAAGCGAGAGGATTTGTGGATTACATCTAAACTATGGTGTACAGATCATGCTCCAGAAGATGTACCACAAGCATTGGACCAAACTTTGAGAGAATTACAACTTGACTATATAGATTTATACCTTATTCACTGGCCAGTTCGAATGAAGAAGGGATCAGTGGGCTTGAAGCTTGAAAACATTATCCAATCAGACATACCTAGTACATGGAAGGCAATGGAAGCTCTCTATGACACTGGCAAGGCTAGAGCTATAGGTGTAAGCAATTTCTCATCTAAGAAGTTGGGAGAATTGCTTGAGGTTGCTCGTGTTCCTCCTGCTGTCAACCAGGTAGAGTGTCACCCTGCATGGCGACAGGACAAGTTGAAGGCCTTTTGCAAATCTAAAGGTGTCCACATCTCTGCATATTCACCTTTGGGTTCCCCTGCTTGGCTTGATGGTGATATCCTTAAGCATCCAATTATAATTATGATTGCTGAGAAATTAGGAAAGACTCCTGCACAGGTAGTTCTTCGATGGGGATTGCAAATGGGCCACAGTGTGCTTCCTAAGAGTTCTAACGTTGCAAGGATAAAGGAAAATATTGATGTATTTGACTGGTCTATACCTGAGGACTTATTTTCTAAAATTTTTGAACTTAAACAGGAAAGATTACTCAAGGTTAACTTCTTAATCCATGAAACTTATGGGGCCTACATACCTGAGGAGGAATTTTGGGATGATGATATCTAA 945 0.4138 MANDIRFFELNTGSKIPSVGLGTWQADHDVVSDSIATAIKVVGYRHIDCAQFYGNQKQIGLTLKKLFEEGVVKREDLWITSKLWCTDHAPEDVPQALDQTLRELQLDYIDLYLIHWPVRMKKGSVGLKLENIIQSDIPSTWKAMEALYDTGKARAIGVSNFSSKKLGELLEVARVPPAVNQVECHPAWRQDKLKAFCKSKGVHISAYSPLGSPAWLDGDILKHPIIIMIAEKLGKTPAQVVLRWGLQMGHSVLPKSSNVARIKENIDVFDWSIPEDLFSKIFELKQERLLKVNFLIHETYGAYIPEEEFWDDDI. 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01774 314 ProSitePatterns Aldo/keto reductase family signature 2. 144 161 IPR018170 GO:0016491
Seca2g01774 314 ProSitePatterns Aldo/keto reductase family putative active site signature. 253 268 IPR018170 GO:0016491
Seca2g01774 314 Gene3D - 4 314 IPR036812 -
Seca2g01774 314 SUPERFAMILY NAD(P)-linked oxidoreductase 8 285 IPR036812 -
Seca2g01774 314 PRINTS Aldo-keto reductase signature 144 161 IPR020471 GO:0016491
Seca2g01774 314 PRINTS Aldo-keto reductase signature 178 207 IPR020471 GO:0016491
Seca2g01774 314 PRINTS Aldo-keto reductase signature 220 244 IPR020471 GO:0016491
Seca2g01774 314 PRINTS Aldo-keto reductase signature 99 117 IPR020471 GO:0016491
Seca2g01774 314 PRINTS Aldo-keto reductase signature 39 63 IPR020471 GO:0016491
Seca2g01774 314 PIRSF AKR 1 306 IPR020471 GO:0016491
Seca2g01774 314 FunFam NADPH-dependent aldo-keto reductase, chloroplastic 5 314 - -
Seca2g01774 314 CDD AKR_AKR4C1-15 6 291 IPR044498 GO:0016491
Seca2g01774 314 ProSitePatterns Aldo/keto reductase family signature 1. 43 60 IPR018170 GO:0016491
Seca2g01774 314 PANTHER ALDO/KETO REDUCTASE 7 286 - -
Seca2g01774 314 Pfam Aldo/keto reductase family 19 283 IPR023210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01774 Seca-Chr2 34186017 34194116 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01774 K00002 - gmx:100788951 523.087