Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01772 ATGCAGGAGAAGATGGACAAAGAAATTGCACATGGGCCTCTATATTTTGATCTGAATACTGGTGCAAAGATACCATCAGTTGGTCTTGGAACATGGAAAGCTCCTCCAGGTGTTGTGGGTGATGCTGTTATTGCTGCAGTCAAGGCTGGTTACAGGCATATAGATTGTGCTCGGGTAGGGGAGGCACTGAAAACATTGTTTTCTACTGGGGTGGTACAGCGTAGTGAAATGTTCATCACATCTAAGCTATGGATCAGTGATTGTGCACCTGAAGATGTCTCAAAGGCACTGCATAGGACTCTAGAGGATCTGCAACTTGACTACATTGATTTATATCTTATGCATTGGCCTTTTAGGACAAAGTCAGGTTCACGAGGTTGGGACCCTGAGGTCATGGCACCTTTATGTCTTCCAGAGACATGGAATGCAATGGAAGGTTTATATGCCTCAGGTCAGGCACGTGCAATTGGAGTGAGCAATTTTTCAACTAAGAAGCTGGAAGACTTGCTCAGATATGCTAAGATTCCACCAGCTGTTAACCAAGTTGAATGCCATCCTGTTTGGCAGCAACCTGCTCTTCATAATTTGTGCATTTCTACTGGTGTTCATCTCACAGCATATTCTCCTCTGGGTTCTCCTGGCTCATGGGTAAAGGGGGAAATCTTGAAGGAACCAGTGTTGATTGAAATTGCTGAAAAACTTCACAAGTCTCCTGCACAAGTAGCTCTGCGCTGGGGGCTCCAAAGTGGTCACAGTGTTCTTCCAAAGAGTGTAAATGAATCTAGGATCAAGGAGAACCTTAGCTTATTTGATTGGTGTATCCCTCCAGAGCTCTTCTCAAAATTCTCACAGATTCACCAGCAAAGGTTACTTCGAGGGGACTTTGCAATCCATGAAACTTGTAGTCCATACAAAAGTCTAGAAGAATTGTGGGATGGAGAAATATGA 948 0.4409 MQEKMDKEIAHGPLYFDLNTGAKIPSVGLGTWKAPPGVVGDAVIAAVKAGYRHIDCARVGEALKTLFSTGVVQRSEMFITSKLWISDCAPEDVSKALHRTLEDLQLDYIDLYLMHWPFRTKSGSRGWDPEVMAPLCLPETWNAMEGLYASGQARAIGVSNFSTKKLEDLLRYAKIPPAVNQVECHPVWQQPALHNLCISTGVHLTAYSPLGSPGSWVKGEILKEPVLIEIAEKLHKSPAQVALRWGLQSGHSVLPKSVNESRIKENLSLFDWCIPPELFSKFSQIHQQRLLRGDFAIHETCSPYKSLEELWDGEI. 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01772 315 CDD AKR_AKR4C1-15 15 292 IPR044498 GO:0016491
Seca2g01772 315 ProSitePatterns Aldo/keto reductase family signature 2. 144 161 IPR018170 GO:0016491
Seca2g01772 315 Gene3D - 14 315 IPR036812 -
Seca2g01772 315 FunFam NADPH-dependent aldo-keto reductase, chloroplastic 13 315 - -
Seca2g01772 315 SUPERFAMILY NAD(P)-linked oxidoreductase 16 291 IPR036812 -
Seca2g01772 315 ProSitePatterns Aldo/keto reductase family putative active site signature. 254 269 IPR018170 GO:0016491
Seca2g01772 315 Pfam Aldo/keto reductase family 39 283 IPR023210 -
Seca2g01772 315 PIRSF AKR 11 307 IPR020471 GO:0016491
Seca2g01772 315 PRINTS Aldo-keto reductase signature 46 70 IPR020471 GO:0016491
Seca2g01772 315 PRINTS Aldo-keto reductase signature 178 207 IPR020471 GO:0016491
Seca2g01772 315 PRINTS Aldo-keto reductase signature 99 117 IPR020471 GO:0016491
Seca2g01772 315 PRINTS Aldo-keto reductase signature 221 245 IPR020471 GO:0016491
Seca2g01772 315 PRINTS Aldo-keto reductase signature 144 161 IPR020471 GO:0016491
Seca2g01772 315 PANTHER ALDO/KETO REDUCTASE 15 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01772 Seca-Chr2 34105161 34108217 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01772 K00002 - gmx:100789478 600.512