Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01619 ATGTTTGATCACAAACCTGCCAAGATATCTATCTTCTCTTTAGTCACTTTCTCTGTTATAATTTTTCTCATCCATGGTGATGGTGTTATCTATGATGATTCCCTACACCCTGATACAAATAAAGGGTCTCTAGATAAGGTGGTGTTGCAAGGTAACATTCACACACATAGAAAAGAGATAAAGTCAACTCTTTCTATTGATCACATACCTTTACGTTCCATACAAGAAGAGAAGAAAAAGAAGAAGAATGATGGGGTTGATAGTGGAAACCAGAAGAGATCACTAGTTGCTCCATTCAATGTCACTGAAGAAGAAAGAATTGCTTGGTTTAAAGGGAAGTTGCAAGAGTTCAAGATTCTCAAGTCAAACAACTTGACAAGGCAATTCCATGCCCGGGTTCTAGGATTCTTCAACAATCAATGTGAGTCTCAATTTTTCATGACTTGGATTTCCCCTGTAAGTTCATTTGGAGCAAGGGAATTGTTGTCAATTGAGTCTCTCTTCAAGGTTCATCCCAAGGGTTGCTTGATGATTCTATCAAGAACTTTGGATTCCATTCATGGATATAGGATCCTTAAACCATTTCTTGATAGAGGGTTCAAAGTTCAAGCAGTGACCCCTGATTTGCCTTTTTTGCTAAAGGGTACTCTAGCTGAAGGTTGGTTTCATGAGTTAAGGAAAGGGAAGAAGGACCCTGGTGAGATTCCTTTGTCTCAGAATCTATCTAACTTGATAAGGCTTGCAGTTCTATACAAATATGGTGGTGTTTACTTAGACACAGATTTTATAGTGTTGAAGCCTTTAAAAGGGTTGAGGAATTGTATTGGTGCACAAAGCATGGATTTTGGTGGTAAGCATTGGACTAGATTGAACAATGCAATTCTGATATTTGATATGAACCATCCACTTCTTCTCAGATTCATTAATGAGTTTGGTTTGACTTTTGATGGAAACAAATGGGGGCATAATGGTCCCTACTTGGTTTCCAGAGTGGTTGGAAAGCTAGGGAAAAGACCAGGTTTCAAATTTACAATTTTGCCTCCTATGGCCTTTTATCCAGCAGATTGGAATAAGATAGGTGGTTTCTTTAGGAAGCCAAAAACTCAAGGTGAAGCAAAATGGGTTGAAGCTAAATTGCTTCAACTTAGAGGTGAGACTTATGGGGTTCATCTATGGAACAAACAGAGTAGTCGATTGACCATTGAAGAAGGAAGTGTCATAGCAAGACTTGTATCAGACAATTGTGTCATTTGCAATTCTCTATAG 1266 0.3839 MFDHKPAKISIFSLVTFSVIIFLIHGDGVIYDDSLHPDTNKGSLDKVVLQGNIHTHRKEIKSTLSIDHIPLRSIQEEKKKKKNDGVDSGNQKRSLVAPFNVTEEERIAWFKGKLQEFKILKSNNLTRQFHARVLGFFNNQCESQFFMTWISPVSSFGARELLSIESLFKVHPKGCLMILSRTLDSIHGYRILKPFLDRGFKVQAVTPDLPFLLKGTLAEGWFHELRKGKKDPGEIPLSQNLSNLIRLAVLYKYGGVYLDTDFIVLKPLKGLRNCIGAQSMDFGGKHWTRLNNAILIFDMNHPLLLRFINEFGLTFDGNKWGHNGPYLVSRVVGKLGKRPGFKFTILPPMAFYPADWNKIGGFFRKPKTQGEAKWVEAKLLQLRGETYGVHLWNKQSSRLTIEEGSVIARLVSDNCVICNSL. 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01619 421 SUPERFAMILY Nucleotide-diphospho-sugar transferases 107 419 IPR029044 -
Seca2g01619 421 Pfam Alpha 1,4-glycosyltransferase conserved region 297 420 IPR007652 -
Seca2g01619 421 Gene3D - 199 342 - -
Seca2g01619 421 Pfam Glycosyltransferase sugar-binding region containing DXD motif 158 279 IPR007577 -
Seca2g01619 421 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 8 420 IPR044789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01619 Seca-Chr2 28799347 28800612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01619 1 421 Glycosyltransferase AT3G09020 47.406 7.07e-137 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01619 K01988 - gmx:100781975 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g01619 2 28799347 28800612 Seca2g01619 2 28799347 28800612 ECH
Seca2g01619 2 28799347 28800612 Seca2g01619 2 28799347 28800612 PCT