Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01305 ATGCAAGAGAAGTTAACACTTCACATACCAAACCAACCACCATTCCCCGCCTCAACCTACACGGCACTCAAAGTCTCACAAAAGGAATCACTATCTTCTTCTTCTTTAATTTCTCCCTTACCCTTCCATTCTTCTCCTCATTCATTTCTTTCCACAAAAAAAAAAAAAGGAACCATGGAAAAGAGATTGGGACTCTTGTTTCTTGTCCTATTGGGTGCTTCCTGGGCTTGTGATGGAAGAGAACTGGCAAACCCTGATCATTGGAGCATTAATACAGCAAACTCTGGCTCTTCTGAACTGAGAAGAATACCAGACGTGTGTGCACTTTGTGAGGAATATACTACCAAGGCACTTGATTATCTAAATGAAAACAAGACCCAGAATGAGATCATTGATATCCTTCACAATACTTGCCACCAGCTTCACTCTTTTGAGAAGAAGTGCATCTCTTTGGTGGACTATTATGCTCCTCTTTTCTTCCTAGAAATATCTACAGTTCAACCAGGTGATTTCTGCCACAAGGTCAACCTCTGTCAGCACATTGCAGATATTTCCTTACAAGTTCAAGAAAATAGCTGTGAGTTTTGCAAAGATACTGTTTCAGCACTATTGGATAAGTTGAAAAATCCTGACACTGAGCTAGAGATAATTCAGACACTACTGAAGGTGTGCAGTTCAGTGGATAAGTATGCGAATAAGTGCAAGAGGATAGTTTTGGAGTATGGACCTTTGATCTTCAAAAATGCAGAGAAATTTCTGGAGACAGCAGATATATGCACTGCATTACATGCCTGCAAGGATTCAACAGTAGTTGGCCAGAAAGCCTTTCTCTCTGACTCTTAA 843 0.4045 MQEKLTLHIPNQPPFPASTYTALKVSQKESLSSSSLISPLPFHSSPHSFLSTKKKKGTMEKRLGLLFLVLLGASWACDGRELANPDHWSINTANSGSSELRRIPDVCALCEEYTTKALDYLNENKTQNEIIDILHNTCHQLHSFEKKCISLVDYYAPLFFLEISTVQPGDFCHKVNLCQHIADISLQVQENSCEFCKDTVSALLDKLKNPDTELEIIQTLLKVCSSVDKYANKCKRIVLEYGPLIFKNAEKFLETADICTALHACKDSTVVGQKAFLSDS. 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01305 280 FunFam Pulmonary surfactant-associated protein B 104 180 - -
Seca2g01305 280 SUPERFAMILY Saposin 105 180 IPR011001 -
Seca2g01305 280 Pfam Saposin-like type B, region 1 193 226 IPR007856 GO:0006629
Seca2g01305 280 Pfam Saposin-like type B, region 1 105 141 IPR007856 GO:0006629
Seca2g01305 280 ProSiteProfiles Saposin B type domain profile. 189 269 IPR008139 -
Seca2g01305 280 Pfam Saposin-like type B, region 2 146 178 IPR008138 -
Seca2g01305 280 Pfam Saposin-like type B, region 2 233 265 IPR008138 -
Seca2g01305 280 Gene3D - 104 179 - -
Seca2g01305 280 PANTHER SAPOSIN-RELATED 57 275 - -
Seca2g01305 280 ProSiteProfiles Saposin B type domain profile. 103 182 IPR008139 -
Seca2g01305 280 Gene3D - 188 268 - -
Seca2g01305 280 SMART sapb_4 191 265 IPR008139 -
Seca2g01305 280 SMART sapb_4 105 178 IPR008139 -
Seca2g01305 280 FunFam Pulmonary surfactant-associated protein B 189 267 - -
Seca2g01305 280 SUPERFAMILY Saposin 191 267 IPR011001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01305 Seca-Chr2 21504716 21509880 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01305 K12382 - gmx:100802366 323.939