Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01189 ATGCATAGATCTGGAGCTGCCATGGCTTGGAACGTGTTCAAGTTCTGCACTGCCCTGCGAGGACTGGGCTCGATCATGATACTGTTGGTTCTTGGGATTGTGGGTGTTACCTATTATGCTGTTGTGTTGACTAATTATGGACCTGCTTTGTATGTTGGTGGCCTTGATTCTCTTACCTCCTTGGTAGTGTTGATCTTGTTTCATTGTTTGTTGGTTATGTTACTGTGGTGTTACTTTGCTGCTGTGTTCACTGATCCGGGAATTGTACCTCCTAACTGGAAGCCTGCTGTTGATGAGGAGAGAGGAGAGGCTGATCCACTAAATGGGTTAGAATTAAGTGATATGCTGTCTGATCCTTCAAATAAACGGATCCGATACTGTCGGAAGTGCAGTCATCCCAAGCCGCCTCGATGTCATCATTGTTCTGTTTGTGGACGTTGTGTGCTGAAAATGGACCACCATTGTGTCTGGGTAGTAAACTGTGTGGGGGCTCTAAATTACAAGTATTTCCTTCTTTTCTTGTCTATACAGCAAGTCAGTGACTTTCTTTCGGGAACTTATCTGATACTATCTGTGATATTGACTTTGTCACTTCCAAGTTGTCACTTGGGTGCACTGTTCTACACTTTTCTTGAGACCACTCTTGTGACTATATCATTGCTGCCTCATTTCAAAACGTTCTTTAGTGATGGAGAAATTCCTGGAACACCCAGCACTCTTGCCACAACTTTTCTTGCTTTTGTTTTGAATCTGGCTTTTTCGTTGAGTGTCTTGGGATTTCTTATCATGCACATATCATTGGTAGCTGCAAATACAACCACTATTGAGGCATACGAGAAGAAAACTACTCCGAAATGGCGCTATGACCTTGGTCACAGAAAAAATTTTGAACAGGTTTTTGGGATGGACAAGAGATACTGGTTCATCCCTGCTTATTCAGAAGAAGATATACGAAGGATGCCAGCTCTTCAGGGCCTTGAGTATCCATCAAAACCTGACTTTGACTCCCAAGAGTGCTGA 1020 0.4324 MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGIVGVTYYAVVLTNYGPALYVGGLDSLTSLVVLILFHCLLVMLLWCYFAAVFTDPGIVPPNWKPAVDEERGEADPLNGLELSDMLSDPSNKRIRYCRKCSHPKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLSIQQVSDFLSGTYLILSVILTLSLPSCHLGALFYTFLETTLVTISLLPHFKTFFSDGEIPGTPSTLATTFLAFVLNLAFSLSVLGFLIMHISLVAANTTTIEAYEKKTTPKWRYDLGHRKNFEQVFGMDKRYWFIPAYSEEDIRRMPALQGLEYPSKPDFDSQEC. 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01189 339 Pfam DHHC palmitoyltransferase 121 280 IPR001594 GO:0016409
Seca2g01189 339 ProSiteProfiles DHHC domain profile. 125 175 - -
Seca2g01189 339 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 26 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01189 Seca-Chr2 19238828 19248651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01189 8 337 Lipid Metabolism Gene Families AT4G22750 57.229 1.03e-120 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01189 K20028 - gmx:102660228 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g01189 2 19238828 19248651 Seca2g01189 2 19238828 19248651 ECH