Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01135 ATGGGGGAGGTGCATGATTGCCATAATAACAAGCAAACCAAAGACCTTCCAGGTTTGCTTGTTACTGATCCTCCAGGAAACTTAGCATTCCTCAAGCCCAAACATCCTCAAAAGTACAATTTATCAAAACCATGGGATGCTTCAGTTTCACTTCACCAGTTCATGGTTGAAAACCACTATGATCCATCAAAGTTTCAAGCCCTTCTATGCTGCCCTTGGGGTCCTCCCATCAATGCTTTAGTTCTCCAACTTCTCCCTTGTCTGAAGCTTGTTGTAACTACAAGCACTGGAACTGATCACATTGACCTCAGTGAGTGCCAATTTAGAGGTATTCAGGTTGCCAATATTGCAGGAAGCTTGTTCTCACAAAATGTAGCTGACATGGCTATGGCTTTGCTCATTGGAGTGCTAACAAAAATTTCAGCTGCAGATAGATTTGTTAGGACACATATGAGGTCTGGCCTAAGAGAGTTTCCACTTTGTTCCAACTCCAAGCTAAGGGGCAAGCGAATTGGGATTGTTGGATTAGGAAACATTGGCATGGAAGTGGCTAAAAGGTTAGAGGCATTTGGATGCATTATTCTGTACCTCTCAAGGAAAAAGAAGCCCTTTATTTCATACCCCTTTTATTCCAACATGGTGGAACTTGCTGCTACTAGTGATGCAATTGTTCTCTGTTGTCCACTAAATGAGCAAACAAGGCACATGGTTAACAAGGAAGTCATGTTGGCATTGGGAAACAAAGGAGTTATAATCAATGTTGGAAGAGGGCCTCTTATTGATGAGAAGGAATTGGTTAAGTGTTTGATTGAAGGACAAATTGGAGGTGCTGGTTTGGATGTGTTTGAGAATGAGCCTAATGTGCCTCAAGAGCTTTTAGCAATGGACACTGTGGTTCTGTCACCACACAGTGCTGCCTTTACTACTGAAACTTACTTGGCTACTGCTGAACTTGTTGCAGAGAATTTAGAAGCCTTCTTCTCCAATAAGCCACTCATCACACCAGTTATATTGGATTGA 1020 0.4225 MGEVHDCHNNKQTKDLPGLLVTDPPGNLAFLKPKHPQKYNLSKPWDASVSLHQFMVENHYDPSKFQALLCCPWGPPINALVLQLLPCLKLVVTTSTGTDHIDLSECQFRGIQVANIAGSLFSQNVADMAMALLIGVLTKISAADRFVRTHMRSGLREFPLCSNSKLRGKRIGIVGLGNIGMEVAKRLEAFGCIILYLSRKKKPFISYPFYSNMVELAATSDAIVLCCPLNEQTRHMVNKEVMLALGNKGVIINVGRGPLIDEKELVKCLIEGQIGGAGLDVFENEPNVPQELLAMDTVVLSPHSAAFTTETYLATAELVAENLEAFFSNKPLITPVILD. 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01135 339 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 130 305 IPR006140 GO:0051287
Seca2g01135 339 Gene3D - 69 331 - -
Seca2g01135 339 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 69 149 - -
Seca2g01135 339 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 18 332 - -
Seca2g01135 339 CDD HPPR 17 328 - -
Seca2g01135 339 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 74 336 IPR006139 GO:0016616|GO:0051287
Seca2g01135 339 Gene3D - 122 308 - -
Seca2g01135 339 FunFam Putative 2-hydroxyacid dehydrogenase 122 308 - -
Seca2g01135 339 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 122 306 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01135 Seca-Chr2 18250717 18252507 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01135 K15919 - gmx:100776772 387.497