Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01101 ATGGAAGCAAGAAGATCTCACACCATCGATATCACAATTTTATCTGCTGAAAACCTCTGCATGAATGGAAAACCAATAAGAAAAAACGCTTACGTTGTCATTCACACTCCTAATCCTAAATTCTTGACAACAACGATGTCAGGAGATGAAAGTGGGAGCTACCCTTCATGGAACGAGAAGTTCACAGTGGAGTTTTGTGATGCCAGCAAGTACATCACATTGGAGGTGCAATGCAAGACATGGTTGGGTGTTCGAAGTGTGGGAACAGCACAAATAGCAGTTTCTGATGTTCTTGGTGGGTTTGTGGGACAGAATTGTTTGCAGTTCTTGAGTTATAGGCTTTGGGATGGGAAGGGTCAGAGAAATGGGATTATCAATTTCTCGGTGAGGGTGAAGGTACCAGATCAGTACTCTGAGTCTTCGTCATGTAATTCGATGCAGATAGCAGTAAAGAGAGCGAATATTAATGATTCTAATGGAGTTGTTACTGGGATTCCAGTTTTCTGGAATTACCCTAGTAATAATATTCCAAGATGA 537 0.4134 MEARRSHTIDITILSAENLCMNGKPIRKNAYVVIHTPNPKFLTTTMSGDESGSYPSWNEKFTVEFCDASKYITLEVQCKTWLGVRSVGTAQIAVSDVLGGFVGQNCLQFLSYRLWDGKGQRNGIINFSVRVKVPDQYSESSSCNSMQIAVKRANINDSNGVVTGIPVFWNYPSNNIPR. 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01101 178 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 9 135 IPR035892 -
Seca2g01101 178 SMART C2_3c 8 106 IPR000008 -
Seca2g01101 178 PANTHER INGRESSION PROTEIN FIC1 8 142 - -
Seca2g01101 178 CDD C2_SRC2_like 8 127 IPR044750 GO:0006952
Seca2g01101 178 Pfam C2 domain 8 98 IPR000008 -
Seca2g01101 178 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Seca2g01101 178 Gene3D C2 domain 7 132 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01101 Seca-Chr2 17804178 17804714 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01101 - - gmx:100816941 196.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g01101 2 17804178 17804714 Seca2g01101 2 17804178 17804714 ECH