Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01016 ATGAAGAGTTTTTACTCAAAGGCATCCTTTCTTTTTGTGGCTTTTGTGGTTGTCACAAATTGCATATTCTCTGAAGCCCAAAGCTGTCGACCAAGTGGCAGAATCATAGGAAAGGAAGCCCCTCCTGGACAATGCAATCAAGAGAATGACTCTGATTGTTGTGAACAAGGCAAAGTGTACACAACTTATCAATGTTCACCACCTGTGTCTGCTCAAACCAGAGCATATCTCACTCTAAACAGTTTCCAAAAGGGTGGAGATGGAGGTGGTCCTTCAGAATGTGACAATCAGTACCATTCTGATGACACACCAGTGGTTGCACTCTCCACAGGATGGTTCAACAACAAGAGCAGGTGCCTCAACAAAATTACCATAAGTGGTAATGGAAGAAGTGTGGTGGCAATGGTGGTTGATGAGTGTGACTCTACCATGGGATGTGATGAAGATCATGATTACCAACCTCCTTGTCGCAACAACATTGTTGATGCTTCCAAAGCTGTGTGGGAAGCCTTGGGTGTGCCACAAGATCAATGGGGTGGCATGGAAATTACATGGTCAGATGCTTGA 567 0.4462 MKSFYSKASFLFVAFVVVTNCIFSEAQSCRPSGRIIGKEAPPGQCNQENDSDCCEQGKVYTTYQCSPPVSAQTRAYLTLNSFQKGGDGGGPSECDNQYHSDDTPVVALSTGWFNNKSRCLNKITISGNGRSVVAMVVDECDSTMGCDEDHDYQPPCRNNIVDASKAVWEALGVPQDQWGGMEITWSDA. 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01016 188 Gene3D - 75 187 IPR036908 -
Seca2g01016 188 CDD DPBB_kiwellin-like 60 187 - -
Seca2g01016 188 SUPERFAMILY Barwin-like endoglucanases 63 186 IPR036908 -
Seca2g01016 188 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 9 187 IPR039271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01016 Seca-Chr2 16521538 16522104 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01016 - - gmx:100802018 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g01016 2 16521538 16522104 Seca2g01016 2 16521538 16522104 ECH