Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00998 ATGCAACTGATTGGTCAAATCATTCATCACTTACTACTTTGTTCAGTGCAACTCAATGATTGTGCTCCATTTTTCCCTTGCATTTCTCTCTTTTTATTATATTCCCAAATTAAACACTATGCAAACATTAGGATTTTCACACCCATATTGCATTATCCACATTTTTTTCCACGCCAATCTTTTTCTTTTCTGTCAACCAAGAAACCCTCTAAGCTTGTGTTTAACCTGAATTTGACTCACAGATTTTACACATCACTCATTTGGGGGCACACAAGACCTTGCTGGAGGAGAAAAGATCCTAGTTCTTTTGAAGTCCAATGTTGCACCAATGGACAATTTGATGATCGGTTTTACATGAGAAAATGTGTAGAGCTTGCAAAGAAGGCTTTTGGGTTTACCAGCCCCAATCCAATGGTGGGGTGTGTTATTGTGAAAGATGGGAAAGTTGTTGGTGAAGGGTTTAACCCCAAAGCAGGCCAACCTCATGCTGAGGTGTTTGCTGTGAGAGATGCAGGGGATTTGGCAGAGAATTCTACAGCATATGTCAGCTTGGAACCTTGTAACCATTTTGGAAAAACTCCTCCTTGTACTGAAGCTTTAATTAAAGCCAAAGTGAAAAAAGTTGTGATTGGAATGGTGGATCCAAATCCTATTGTGGCCCACAAAGGAGTGGCTAGATTGAGAGAAGCAGGAATTGAAGTTGTTGTTGGTGTAAAGGAAGAATTATACAAGAGCCTCAATGAGGCCTATATACATCGTATGTTGACTGGAAAACCTTTCCTTACTTTAAGATATTCTCTTTCTGTCAATGGTAAGTTTTTGGACTTAATTGGGGATGGAGTTAAAGACAGTGGTGGTTATTATTCACGGTTATTACAAGAATATGATGCAGTGGTACTTTCTTCTTCCTTGTTCAGTAAAGATTTCTCTGTGTCTACATCTAAAGAGCCTGGAGCCAATCAACCACTTCATATTATAGTACAAAAAAGTACTAGTTCTTCCAATCAAGTTCCTCTAGTCATCAATGAAGTTACTGGTAATGTGATCATTCTTACAGATATTAGGATAGCAGCACCTCAAGATAAGGCTCAACAAGGAATTGAAATTGTTGCTTTGGATGAGATAAATCTGGATGTGATCTTAGATTACTGTAATTGTCAAGGTTTGAACAGTGTACTGTTGGATTTTAGGGGTAATTTCAGTGAGTTTGAAGAGCTTATTAAGGAGGGTATTGAGAAGAAATATTTTAATAAATTTGTGACAGAAATTTTGCCAGTTTGGAATGGATGTGCTAAGATGGATCCTATGATGCCATTGAAAAGTTTACAGCAAGGAATAGAAGTGATAAATTTACAGTCCATGGCCTCAGGTCAAAGTGTTGTACTTGAAGGATATTTTAAATTTTAA 1407 0.3746 MQLIGQIIHHLLLCSVQLNDCAPFFPCISLFLLYSQIKHYANIRIFTPILHYPHFFPRQSFSFLSTKKPSKLVFNLNLTHRFYTSLIWGHTRPCWRRKDPSSFEVQCCTNGQFDDRFYMRKCVELAKKAFGFTSPNPMVGCVIVKDGKVVGEGFNPKAGQPHAEVFAVRDAGDLAENSTAYVSLEPCNHFGKTPPCTEALIKAKVKKVVIGMVDPNPIVAHKGVARLREAGIEVVVGVKEELYKSLNEAYIHRMLTGKPFLTLRYSLSVNGKFLDLIGDGVKDSGGYYSRLLQEYDAVVLSSSLFSKDFSVSTSKEPGANQPLHIIVQKSTSSSNQVPLVINEVTGNVIILTDIRIAAPQDKAQQGIEIVALDEINLDVILDYCNCQGLNSVLLDFRGNFSEFEELIKEGIEKKYFNKFVTEILPVWNGCAKMDPMMPLKSLQQGIEVINLQSMASGQSVVLEGYFKF. 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00998 468 NCBIfam bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD 119 401 IPR004794 GO:0008835|GO:0009231
Seca2g00998 468 CDD Riboflavin_deaminase-reductase 119 231 - -
Seca2g00998 468 SUPERFAMILY Dihydrofolate reductase-like 259 466 IPR024072 -
Seca2g00998 468 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 114 244 - -
Seca2g00998 468 FunFam Riboflavin biosynthesis protein RibD 112 252 - -
Seca2g00998 468 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 113 235 IPR002125 -
Seca2g00998 468 Gene3D Cytidine Deaminase, domain 2 107 252 - -
Seca2g00998 468 Gene3D Dihydrofolate Reductase, subunit A 253 465 IPR024072 -
Seca2g00998 468 SUPERFAMILY Cytidine deaminase-like 115 254 IPR016193 GO:0003824
Seca2g00998 468 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 115 212 IPR002125 -
Seca2g00998 468 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 162 200 IPR016192 GO:0008270|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00998 Seca-Chr2 16033110 16035230 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00998 K11752 - gmx:100789675 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00998 2 16033110 16035230 Seca2g00998 2 16033110 16035230 ECH