Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00912 ATGTCGCAGTTGTTGGACAAAGCCAAAAACTATGTTTCAGACAAAGTTGCTAACATGCCCAAGCCAGAGGCGAATATCACCGACGTGGATTTCAAGCGCGTGAGCCGTGAGTGCGTTGAGTACTTGGCCAAGGTCTCTGTTTCTAACCCTTATTCCGCTCCAATTCCAATCTGTGAGATCAAGTATTCCCTCAAAAGTGCTGGCAGGGAAATAGCATCAGGGACCATACCAGACCCAGGGTCTTTGAAGGCAAATGACACAACAATGCTGGATGTGCCAGTCAAGGTGCCTCACAGCATATTGCTTAGCTTGGCAAAGGACATTGGTGCAGATTGGGACATAGATTATCAATTGGATCTTGGCCTAATCATTGACCTTCCTGTCATTGGCAACTTCACCATTCCCCTTTCTCAAAAGGGAGAGATCAAGCTCCCAACTCTCTCTGACATGTTTCCCTAG 459 0.4706 MSQLLDKAKNYVSDKVANMPKPEANITDVDFKRVSRECVEYLAKVSVSNPYSAPIPICEIKYSLKSAGREIASGTIPDPGSLKANDTTMLDVPVKVPHSILLSLAKDIGADWDIDYQLDLGLIIDLPVIGNFTIPLSQKGEIKLPTLSDMFP. 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00912 152 SMART why 24 141 IPR013990 GO:0009269
Seca2g00912 152 SUPERFAMILY LEA14-like 1 150 - -
Seca2g00912 152 PANTHER - 3 148 IPR045043 -
Seca2g00912 152 Pfam Late embryogenesis abundant protein 44 140 IPR004864 -
Seca2g00912 152 FunFam Desiccation protectant protein Lea14-like 17 151 - -
Seca2g00912 152 Gene3D - 17 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00912 Seca-Chr2 14123880 14125451 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00912 - - gmx:547837 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00912 2 14123880 14125451 Seca2g00912 2 14123880 14125451 ECH
Seca4g11366 4 252358838 252359536 Seca2g00912 2 14123880 14125451 PCT