Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00903 ATGGCGAGTACTCACCACCGCTCAAACTCTTCTTCCTCCACTGACATTTCAGTGTATTTGGACGCCGATGCTACTTCCATTTCCGCTACTTCTTCAGGACATATTGACAGGAATTCATCAACTGCGTCACAGAATGTGGGAGCAACAGGAGGTGTGGGTGTTATGGCTGAAGAAGCTGAACCGTCAAATCACGGTCACCGTAACAATGCTGTTAAACTTGTAAAGGGAAACGGACTTAGTGCATTGGCTAAGTTCTTCGATGAGAATATTCCCCTGAAGAAAAGGTTGCGATGGCTAAAACAAGCTTCCCTGGTTAAGGCTGATGGTACTGTAGAAATTGATGTTCCAAATGTTAAGCACCATTCTCCAGAAAGGGAAAGTGGGGACATCTATAAAGAAGCTCATGATGGATCTTCTAAGGCAAAACTCAGTCAGGATATTCAGCCTATTCAGCCACTTCAAATTGCAATGCTTATAGTAGGCACACGGGGAGATGTCCAGCCATTTGTTGCCATCGGGAAGCGTCTGCAGGGAGATGGTCACAGGGTTAGGCTAGCTACTCATAAAAATTTTGAAGATTTTGTCTTGAATGCAGGCTTGGAGTTTTACCCTTTAGGTGGAGATCCCAAAGTTCTTGCCGGTTATATGGTCAAGAATAAAGGCTTCTTGCCATCAGGGCCTTCAGAAATACATTTACAAAGAAAACAAATCAAGGCTATTATTAATTCTTTGCTTCCTGCATGCAATAGTCCTTACCCAGATTCTAGTGTTCCATTTAAAGCAGATGCGATAATTGCCAATCCTCCAGCATATGGGCATACTCATGTTGCTGAGTATCTAAAAGTTCCACTTCACATATTCTTCACAATGCCATGGACGCCTACTAGTGAATTCCCTCATCCTCTTTCCCGTGTTAAGCACCAAGTTGGATACAGACTGTCATATCAAATAGTTGATTCTTTAATCTGGCTTGGAATACGAGACTTGGTTAATGAGTTTAGGAAGAAGAAGCTGAAGCTAAGGCCTATTACTTATCTAAGTGGATCTCACACTTCCCCTCCTGAGGTGCCCTATGGTTATATATGGAGCCCTCACTTGGTCCCTAAACCAAAAGATTGGGGGTCTAATATTGACGTTGTTGGATTTTGTTTCCTTGACCTTGCTTCAAATTATGAACCACCAAAATCACTAGTAGATTGGCTTGAAGAAGGCGAAAAACCTATTTATGTTGGATTTGGAAGCCTTGTGAGTTTCTATGTTCTCATATTTAGGTCATCTGATTACATTGTGATCTGCAGAATGCACTGTTTGACTAAATATAACTTTCCTGAGTATCGTTTGCCAATCATTCCTCCTAAAATCGCTAGTCAGTAA 1374 0.4185 MASTHHRSNSSSSTDISVYLDADATSISATSSGHIDRNSSTASQNVGATGGVGVMAEEAEPSNHGHRNNAVKLVKGNGLSALAKFFDENIPLKKRLRWLKQASLVKADGTVEIDVPNVKHHSPERESGDIYKEAHDGSSKAKLSQDIQPIQPLQIAMLIVGTRGDVQPFVAIGKRLQGDGHRVRLATHKNFEDFVLNAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSEIHLQRKQIKAIINSLLPACNSPYPDSSVPFKADAIIANPPAYGHTHVAEYLKVPLHIFFTMPWTPTSEFPHPLSRVKHQVGYRLSYQIVDSLIWLGIRDLVNEFRKKKLKLRPITYLSGSHTSPPEVPYGYIWSPHLVPKPKDWGSNIDVVGFCFLDLASNYEPPKSLVDWLEEGEKPIYVGFGSLVSFYVLIFRSSDYIVICRMHCLTKYNFPEYRLPIIPPKIASQ. 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00903 457 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 80 417 - -
Seca2g00903 457 Pfam Glycosyltransferase family 28 N-terminal domain 155 299 IPR004276 GO:0005975|GO:0016758|GO:0030259
Seca2g00903 457 FunFam Sterol 3-beta-glucosyltransferase UGT80A2 155 387 - -
Seca2g00903 457 CDD GT1_Gtf-like 155 418 IPR002213 GO:0008194
Seca2g00903 457 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 155 418 - -
Seca2g00903 457 Gene3D Glycogen Phosphorylase B; 154 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00903 Seca-Chr2 13980304 13991014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00903 83 415 Glycosyltransferase AT3G07020 70.796 1.74e-170 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00903 K05841 - gmx:100779695 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00903 2 13980304 13991014 Seca2g00903 2 13980304 13991014 ECH