Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00875 ATGGCTCTGCGCTTCAACAATCGAAGAACCGTTCTCGCTCTTCGCCTCTTCCTTCTCTTCCTCTGCTTCCTCTCGCCGACCTTCGCTCAGGATTCTTTGGTTCATAACGTGAAGGAAGAGTCCGGTGGATCTGTGGATCTCGGTCGCCGCGGCAAAGTTGATGTTATCAGTACTTTTTGTGAACAGGTTGCGTTGAATGATTTAGAGAATGGTTCGGTCCTTTCTCTTGGCTTGGACGCCACTGGTGTTGGACTCTTTGATGCATTTTTTGCAAGTCTATCAATGATCATTGTCAGTGAGATTGGGGATGAGACATTTATAATAGCTGCTCTTATGGCTATGCGTCACCCTAAGTCAATTGTCTTGTCTGGTGCGCTCACTGCCCTGATTATAATGACAGTACTTTCTACAGGACTAGGTAGGATTGTGCCAAATTTGATTTCAAGGAAGCATACAAATAGTGCTGCTACAGTTCTTTATGCTTTCTTTGGGTTACGATTACTGTACATTGCTTGGAGATCATCAGATTCAAAATCTTCACAGAAGAAAGAAATGGAAGAAGTTGAAGAAAAACTTGAAGGTGGACAAGGGAAAACTTCATTTCGACGCTTCTTTTCAAGATTTTGTACTCCAATATTTTTGGAGTCTTTTATTTTAACATTCCTTGCTGAATGGGGTGATCGCAGCCAGATTGCGACTATTGCACTGGCGACCCACAAAAATGCAATTGGAGTAGCAGTTGGGGCCACTATAGGACACACCATCTGTACCTCACTGGCAGTAGTGGGGGGAAGTATGTTGGCTTCAAAGATTTCCCAACGCACAGTAGCCACAGTTGGTGGCTTGCTCTTCCTCGGCTTTTCTTTGTCTTCATACTTCTACCCTCCTCTATAA 894 0.4407 MALRFNNRRTVLALRLFLLFLCFLSPTFAQDSLVHNVKEESGGSVDLGRRGKVDVISTFCEQVALNDLENGSVLSLGLDATGVGLFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALTALIIMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSSDSKSSQKKEMEEVEEKLEGGQGKTSFRRFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQRTVATVGGLLFLGFSLSSYFYPPL. 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00875 297 Coils Coil 178 198 - -
Seca2g00875 297 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 49 294 IPR001727 -
Seca2g00875 297 Pfam Uncharacterized protein family UPF0016 215 287 IPR001727 -
Seca2g00875 297 Pfam Uncharacterized protein family UPF0016 91 164 IPR001727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00875 Seca-Chr2 13523724 13528265 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00875 K23541 - gmx:100786634 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00875 2 13523724 13528265 Seca2g00875 2 13523724 13528265 ECH