Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00849 ATGGCTCTGAATCTCTGCGTCTCCCCAAAGTGTAAATGGCTCGTCTCCTCTTCTCCTTCCACGATCTTGTTGGATAACAATGCTTCTTCCTTGAAGCTATCATCATTCGGTTCTTCTTCAATGAACAATGCTAGTGTCAGTAGTAGTAGTAGTACTGTGAGTTTGAGGAGGAGTTCAAGTCTGAATCTCACTGTAAGATCTAGCTTGGAAATGGCGGGGCCTACTGTCACTGTAGGTCAGGTCACTGAAGTAAACAAGGATACCTTCTGGCCCATCGTTAAAGCCGCCGGTGATAAAACCGTCGTCCTAGACATGTACACTCAATGGTGTGGTCCTTGCAAAGTGATGGCTCCAAAGTTTCAAGAGTTATCTGAGAAGTATCTGGATGTTGTCTTTCTAAAGCTTGATTGCAACCAAGAGAACAAGCCCTTGGCAAAAGAGCTCGGAATTAAAGTGGTTCCCACTTTCAAAATTCTTAAGGACAGCAAGGTTGTAAAGGAGGTTACCGGAGCTAAATATGATGATTTGGTCGTTGCAATAGACAGCGTTCGATCTAGCTAA 561 0.4403 MALNLCVSPKCKWLVSSSPSTILLDNNASSLKLSSFGSSSMNNASVSSSSSTVSLRRSSSLNLTVRSSLEMAGPTVTVGQVTEVNKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEKYLDVVFLKLDCNQENKPLAKELGIKVVPTFKILKDSKVVKEVTGAKYDDLVVAIDSVRSS. 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00849 186 CDD TRX_family 87 171 - -
Seca2g00849 186 PRINTS Thioredoxin family signature 101 109 - -
Seca2g00849 186 PRINTS Thioredoxin family signature 149 160 - -
Seca2g00849 186 PRINTS Thioredoxin family signature 109 118 - -
Seca2g00849 186 PANTHER THIOREDOXIN-LIKE PROTEIN 1 79 180 - -
Seca2g00849 186 Gene3D Glutaredoxin 66 185 - -
Seca2g00849 186 Pfam Thioredoxin 81 180 IPR013766 -
Seca2g00849 186 ProSiteProfiles Thioredoxin domain profile. 60 185 IPR013766 -
Seca2g00849 186 SUPERFAMILY Thioredoxin-like 74 182 IPR036249 -
Seca2g00849 186 ProSitePatterns Thioredoxin family active site. 102 120 IPR017937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00849 Seca-Chr2 12941513 12944846 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00849 K03671 - gmx:100499776 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00849 2 12941513 12944846 Seca2g00849 2 12941513 12944846 ECH