Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00846 ATGGCTGGTGGTGTTTCTATTTTGCCATGGATCATTGTTGTCGTGATGTGTATGTGTTTGGTGGTGAGTGGTTCTTCGAATTCCACGACGATATACGATGAGCTTAGGGCTCAAGGGCTTCCGGTAGGTCTTCTTCCAAAGGGAATAACAAAGTATAAGATTAATGGTAGCAGTGGTGAGTTTGAGGTATTGATGGAACAAGCGTGCAATGCCAAGTTCGAGAACGAGGTGCACTATGATTCCAACATTAAGGGTACCCTTGGTTATGGTCAGATCGGGAAATTATCCGGTGTGTCTGCTCAGGAGCTATTCCTATGGTTCCCTGTGAAGGGAATTCGTGTTGATGTTCCTAGCTCAGGCCTCATCCACTTTGATGTTGGTGTTGCTGATAAACAATTTTCTGTGTCCCTCTTTGAAGACCCTCCTGATTGCAACCCTGAGGCTAAGGCTGTGGATGATGATGTGCTGAGGGCTGTTTGGTAG 483 0.4617 MAGGVSILPWIIVVVMCMCLVVSGSSNSTTIYDELRAQGLPVGLLPKGITKYKINGSSGEFEVLMEQACNAKFENEVHYDSNIKGTLGYGQIGKLSGVSAQELFLWFPVKGIRVDVPSSGLIHFDVGVADKQFSVSLFEDPPDCNPEAKAVDDDVLRAVW. 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00846 160 Pfam Protein of unknown function, DUF538 32 139 IPR007493 -
Seca2g00846 160 SUPERFAMILY At5g01610-like 10 145 IPR036758 -
Seca2g00846 160 FunFam Uncharacterized protein At3g07460 19 149 - -
Seca2g00846 160 PANTHER T31J12.3 PROTEIN-RELATED 19 144 IPR007493 -
Seca2g00846 160 Gene3D - 18 149 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00846 Seca-Chr2 12921985 12923743 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00846 - - gmx:100778787 236.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00846 2 12921985 12923743 Seca2g00846 2 12921985 12923743 ECH