Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00844 ATGGCTATGGCTATGAAGGCTACGCCTATCACAGGTTCGGGCTTCGTTTCAACAAGACCTTCCAAACTTCCACCCTTCAAATCATCATTCCTCAGTTATGGGGCTGGAGTACTGGAAGTTCCTGGAATACGAGTATCCCACTCCAATAGATTAAAAAGCAAATGTCAAGGTAGTGGTGGTGCCCTTGGTGCTCAGATGAATCTTTTTAGTAGGTTTGCTAGAGTTATCAAGTCATATGCTAATGCCATTATAAGCTCCTTTGAAGACCCTGAGAAGATTTTAGAACAAGCTGTTGCGGATATGAATAATGATTTGATAAAGGTTCGCCAAGCTACAGCACAAGTTCTAGCTTCTCAAAAGCAGTTAGAAAGCAAGTACACAGCCGTCCAAAAAGCTTCTGATGATTGGTATCGAAGGGCACAACTTGCTCTTCAGAAGGGGGATGAGAATCTTGCTCGCGAAGCACTTAAGCGAAGAAAGTCTTATGCTGATAATGCAACTGCTTTGAAGGTACAGCTTGAACAGCAAAAGAATGTTGTTGATAGTCTTGTGTCCAAAACACAGCTTTTGGAGAGCAAGATACAGGAGGCAAAGTCAAAGAAAGATACTCTCAAAGCAAGAGCTCAGTCTGCAAAGACTGCAACCATATTAAGTGAGATGGTGAGCAATATCAGCACAAGCAGTGCCCTTGCAGCTTTTGATAAGATGGAGGAAAAGGTATTAACCATGGAGGCTCAAGCAGACGCCTTGAATCAGTTGACGACTGACAATCTTGAGGGCAAGTTTGCAATGCTAGAGAACTCTTCTGTCGATGATGATCTTGCAGAGTTAAAGAGAGAATTATCTGGAAGCTCTAAGAGGGGAGAACTTCCACCTGGAAGAACTGTTCCTACAAACAAAGAATTTCCGTTCCCTGACTTGGAGGTTGAGAAGGAGCTTAATGAATTGAGAAGAAAAGCAAAGGGGTTCTAG 972 0.429 MAMAMKATPITGSGFVSTRPSKLPPFKSSFLSYGAGVLEVPGIRVSHSNRLKSKCQGSGGALGAQMNLFSRFARVIKSYANAIISSFEDPEKILEQAVADMNNDLIKVRQATAQVLASQKQLESKYTAVQKASDDWYRRAQLALQKGDENLAREALKRRKSYADNATALKVQLEQQKNVVDSLVSKTQLLESKIQEAKSKKDTLKARAQSAKTATILSEMVSNISTSSALAAFDKMEEKVLTMEAQADALNQLTTDNLEGKFAMLENSSVDDDLAELKRELSGSSKRGELPPGRTVPTNKEFPFPDLEVEKELNELRRKAKGF. 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00844 323 PANTHER MEMBRANE-ASSOCIATED PROTEIN VIPP1, CHLOROPLASTIC 24 322 IPR007157 -
Seca2g00844 323 Coils Coil 180 214 - -
Seca2g00844 323 Coils Coil 233 253 - -
Seca2g00844 323 MobiDBLite consensus disorder prediction 280 307 - -
Seca2g00844 323 Pfam PspA/IM30 family 67 280 IPR007157 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00844 Seca-Chr2 12908077 12913262 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00844 K03969 - gmx:100794403 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00844 2 12908077 12913262 Seca2g00844 2 12908077 12913262 ECH