Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00843 ATGGCTTCCGTTCCTTTGCTCCGCCCCTGTTTCCTCCACACCCCGAAACCCTTAACCCTAACACTTAGAAAACCCTCTTTCACAGTCACTCCCTTAACATTCTCACCTCTATCTTCCAAACCCAAGCTCCGAAACGTCGTCGTTATGTCCTCCTCTTCCTCTCCCCTACCAACAGAGCGGTTAATCTCCATCGCCGCATACACTCTCCCATTCTTCAATTCCCTTCAATACGGTCGCTTCATCCTCTCTCAATACCCCAAATTCGCACTCCTCTTCGACCCTATCATCCCCTTCCTCACCTTCTACAGGTCCATCCCTTATTCTTCCTTCGTCGCATTCTTCGCACTCTACTTAGGCGTCGTCAGAAACCCTAGCTTCCCTCACTATGTAAGGTTCAATGCAATGCAAGCCGTAACCCTCGATGTTCTCCTCGTCATTCCACTCCTCCTCCAGCGGATCTTCTCTCCGGGTCGGGCTGGCATCGGGTTCCGTGTCATGATTTGGTCACACAATGCCATCTTCCTTTTCAGCCTCGCTTGCTTCCTATACGGCGTCGTTTCATGTGTCTTGGGTCGTACCCCGTACTTGCCCTTTGTTGCTGATGCTGCTTCTAGGCAAATCTAA 624 0.5096 MASVPLLRPCFLHTPKPLTLTLRKPSFTVTPLTFSPLSSKPKLRNVVVMSSSSSPLPTERLISIAAYTLPFFNSLQYGRFILSQYPKFALLFDPIIPFLTFYRSIPYSSFVAFFALYLGVVRNPSFPHYVRFNAMQAVTLDVLLVIPLLLQRIFSPGRAGIGFRVMIWSHNAIFLFSLACFLYGVVSCVLGRTPYLPFVADAASRQI. 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00843 207 Pfam Chloroplast import apparatus Tic20-like 59 203 IPR005691 -
Seca2g00843 207 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 46 207 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00843 Seca-Chr2 12903104 12903727 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00843 - - vra:106779574 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00843 2 12903104 12903727 Seca2g00843 2 12903104 12903727 ECH