Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00842 ATGGATGCCATACGGAAGCAGCTTGATGTGTTGATGGGAGCCAATCGAAACGGCGACGTTCGAGAAGTTAACCGCAAGTACTACGATCGCGATGTCTGTCGCCTCTACCTCGTTGGTCTTTGCCCTCACGAACTCTTTCAGTTAACGAAAATGGATATGGGTCCTTGCCCCAAGGTGCACTCCTTGCAGCTCAGGAAAGAATATGAAGAAGCGAAAGCAAAAGGGAGCGATAATTATGACAGGGAGTTGGAGGATGTTATAGATAAGCTTATTGGAGAGTGTGATAGGAAAATAGGCAGAGCGCTTAAGCGTCTCGAGGACGATGATGCGAAGGCTGCGATTGCAATTTCAGTCTCCGAAGTTACTCAGACACCTGAGGTGCTTGAGCTGTCCAAACAAATCAAAGAGAAGTTGAAAGAAGCTGATCAATATGATCTTGAAGGCAAGACAGATATGAAGATTCGGGCTTTGGAGATTGTAGAAGAACTTAGAACTAAAAGAGCAGACAAGCAGTCTATGCTTCTTTTAGATGCGTTTAACAAAGATAGAGCATCTTTACCTCAACCTCTGCCAAATCCACCGCCTTTGGCACCCCTTCCTGTAGTTACTCCTGATGCTCGAACACAGGAGATGATAAATGAAAAGTTGAAGAAGGCTGAGGATCTTGGTGAGCAAGGAATGGTTGATGAGGCACAAAAAGCATTGGAAGAGGCTGAAGCACTTAAGAAGCTTCCAGCCAGGCAGGAGCCAGTATTGGATTCTTCAAAGTATACTGCTGCAGATGTGCGGATTACTGATCAGAAGCTACGTGTTTGCGACATTTGTGGAGCATTTTTGAGTGTTTATGACAGGTAA 855 0.4515 MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLVGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKAKGSDNYDRELEDVIDKLIGECDRKIGRALKRLEDDDAKAAIAISVSEVTQTPEVLELSKQIKEKLKEADQYDLEGKTDMKIRALEIVEELRTKRADKQSMLLLDAFNKDRASLPQPLPNPPPLAPLPVVTPDARTQEMINEKLKKAEDLGEQGMVDEAQKALEEAEALKKLPARQEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYDR. 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00842 284 Pfam LUC7 N_terminus 208 283 IPR004882 GO:0003729|GO:0005685|GO:0006376
Seca2g00842 284 Pfam LUC7 N_terminus 2 172 IPR004882 GO:0003729|GO:0005685|GO:0006376
Seca2g00842 284 Coils Coil 127 147 - -
Seca2g00842 284 PANTHER RNA-BINDING PROTEIN LUC7-RELATED 208 283 IPR004882 GO:0003729|GO:0005685|GO:0006376
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00842 Seca-Chr2 12894614 12902228 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00842 - - gmx:100793888 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00842 2 12894614 12902228 Seca2g00842 2 12894614 12902228 ECH