Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00832 ATGCGTTTCTGTCCCTGTTGCGGAGATTCCGAGAAGCCAGTCCCGGATCGTGACCCGGTCCTGCTGGTTTCAGGCATGGGTGGCTCCATCCTCAACTCCAAGCCTAAGAAATTCGGGTTCATCACTCGGGTTTGGGTCAGGATCCTCCTCGCTGACTTGGAGTTCCGAAAGAAGATATGGTCCATTTACAATCCCCAAACAGGTTACACAGAAACGTTAGACAAGAAATCTGAAATTGTGGTCCCTGACGATGATCACGGTCTATATGCAATCGATATTTTGGATCCATCATGGTTTACGAAGTGTATACACTTGACAGAGGTATACCATTTTCATGACATGATTGACATGCTTGTTGAATGTGGGTACGTGAAAGGAACCACGTTGTTTGGATACGGATATGATTTCAGGCAAAGCAATAGGATTGACAAGTTACTGGATGGTCTTAAACTCAAGCTGGAAACTGCTTACAAAGCCTCTGGTGGAAGAAAAGTCAATATAATTTCACACTCGATGGGAGGAATAATGATCTTGTGTTTCATGTCACTTCACAAAGATGTGTTTTCGAAATATGTGAATAAGTGGATTTGCTTGGCTTGCCCTTTCCAAGAAAAATCTCCAATCACCCTTTCAAAAGTTTTAATTGGGGCATCATTGCCAAGTAAGTGGCCAAAGTCCAGTTCAAATGAACTGGCTCTCCAAAGGAATGAGTTGGATGGTGAACAGGCTTTGAATCCTTTGAAACTAGTAGATATGAGCTACATACAAGACAGAATGGCTTTGAGGGGTATTGGAGATGTTCTCTGCTGTAGAATGGCTAAGCCTAAGATCATTCTCCACATATACACTTTCACAATCTCTCTGAGATCTCCTCCCTTCAACTACCCATTTGAAATTTCTAACTTAGCCATTGAAGGCTCCACTCTGACGAACCTCTCTGGCACTGTAGAGTGTCCATCAGTCTATGAAATGTTGGCAAATCCCGAATATGAATGGAAAAAGCAGCCAGAAATTCAAGTTTGGCGGAAGCATACAAAGGATGGGAATATTAGCGTCAATTTGGAATCTTATGGACCGTACCAGAGTATCACTTTATTTGAAGAAGCACTGAGGCACAATGAGCTAAATTATAATGGAAAAACAGTATCATTGCCTTTTAACCTTGCTATACTCAAATGGGCTGCTGGAACTCGTCAACTTATATCAAATGCTAAACTGCCGGATGGAGTCAGCTTCTATAACATTTATGGGACATCATTTGAGACACCTTTTGATGTGTGCTATGGTTCAGAAAAATCTCCAATAGATGACTTATCTGAAATATGCCAGACAATGGTAAGCCACTTAATCTCTTATATGTTAAAGATAAAAGCCACAAATGAGACTCTGATATCTTCATTCTCTTAA 1407 0.4122 MRFCPCCGDSEKPVPDRDPVLLVSGMGGSILNSKPKKFGFITRVWVRILLADLEFRKKIWSIYNPQTGYTETLDKKSEIVVPDDDHGLYAIDILDPSWFTKCIHLTEVYHFHDMIDMLVECGYVKGTTLFGYGYDFRQSNRIDKLLDGLKLKLETAYKASGGRKVNIISHSMGGIMILCFMSLHKDVFSKYVNKWICLACPFQEKSPITLSKVLIGASLPSKWPKSSSNELALQRNELDGEQALNPLKLVDMSYIQDRMALRGIGDVLCCRMAKPKIILHIYTFTISLRSPPFNYPFEISNLAIEGSTLTNLSGTVECPSVYEMLANPEYEWKKQPEIQVWRKHTKDGNISVNLESYGPYQSITLFEEALRHNELNYNGKTVSLPFNLAILKWAAGTRQLISNAKLPDGVSFYNIYGTSFETPFDVCYGSEKSPIDDLSEICQTMVSHLISYMLKIKATNETLISSFS. 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00832 468 Pfam Lecithin:cholesterol acyltransferase 71 203 IPR003386 GO:0006629|GO:0008374
Seca2g00832 468 SUPERFAMILY alpha/beta-Hydrolases 15 210 IPR029058 -
Seca2g00832 468 Gene3D alpha/beta hydrolase 60 269 IPR029058 -
Seca2g00832 468 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 12 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00832 Seca-Chr2 12548903 12554551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00832 316 445 Acyl Lipid Metabolism Gene Families AT3G03310 67.176 1.20e-57 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00832 K22389 - gmx:100797043 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00832 2 12548903 12554551 Seca2g00832 2 12548903 12554551 ECH