Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00690 ATGGGCTCTTTCTTCTCTTCCTTAACCGGCGCTGGCGGCGGCGATGAACACGAGGAGAGTTCTCGCGTCATAACCCACCACTCGTCGGCGCGTTGGCAGCTCCACTTCAACGAACTCAAAGACTCCTCTCAACTCGTGGTGATAGATTTCTCTGCGTCGTGGTGCGGTCCCTGCAGGTTCATAGAGCCGGCGATTCACGCCATGGCCGAAAAATTCACCGACGTTGTATTCATCAAGATCGACGTCGACGAATTATCTGATGTGGCACAGGAGTTTCAGGTGCAGGCAATGCCGACTTTCGTGTTGACGAAGAAAGGGAAGGAGATTGAGAGAGTTGTTGGCGCCAAGAAGGACGAGCTTGAGAAGAAGATTGAGAAGAACCGAGCTATATAA 393 0.5216 MGSFFSSLTGAGGGDEHEESSRVITHHSSARWQLHFNELKDSSQLVVIDFSASWCGPCRFIEPAIHAMAEKFTDVVFIKIDVDELSDVAQEFQVQAMPTFVLTKKGKEIERVVGAKKDELEKKIEKNRAI. 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00690 130 ProSitePatterns Thioredoxin family active site. 47 65 IPR017937 -
Seca2g00690 130 CDD TRX_family 35 125 - -
Seca2g00690 130 FunFam Thioredoxin 22 129 - -
Seca2g00690 130 MobiDBLite consensus disorder prediction 1 22 - -
Seca2g00690 130 PANTHER THIOREDOXIN 23 126 - -
Seca2g00690 130 SUPERFAMILY Thioredoxin-like 35 126 IPR036249 -
Seca2g00690 130 PRINTS Thioredoxin family signature 46 54 - -
Seca2g00690 130 PRINTS Thioredoxin family signature 93 104 - -
Seca2g00690 130 PRINTS Thioredoxin family signature 54 63 - -
Seca2g00690 130 ProSiteProfiles Thioredoxin domain profile. 11 129 IPR013766 -
Seca2g00690 130 Pfam Thioredoxin 36 126 IPR013766 -
Seca2g00690 130 Gene3D Glutaredoxin 13 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00690 Seca-Chr2 10341068 10342088 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00690 K03671 - cave:132183411 200.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00690 2 10341068 10342088 Seca2g00690 2 10341068 10342088 ECH