Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00037 ATGGCCATCAGTCACGCTACATTGGCTTTTACCTTTGGCATGCTGGGTAATGTCATTTCGTTCTTGGTATTCTTGGCTCCAATATCAACATTTTACCGAATATACAAGAAGAAATCGACAGAGGGTTTTCAGTCACTGCCTTACCTAGTGGCATTGTTTAGTTCCATGCTTTGGTTGTATTATGCTTTGGTGAAGAAAGATGCTATGCTCCTCATTACCATTAACTCATTTGGCTGCGTCATAGAGACCATCTACATCATCTTGTACATCATCTATGCGCCCACCGATGCAAGGAACTTAACTTTTAAGCTATTTTCGGCAATGAACGTGGGCTCCTTTGCTTTGATCCTCTTAGTCACACATTTCGCTGTGCATGGCCCCCTTCGTGTCCAAGTCCTTGGATGGATTTGTGTTTCTATTTCAGTCAGTGTTTTTGCAGCACCATTAAGCATTCTGGCACAAGTTGTTCGGACAAAGAGTGTGGAGTTTATGCCCTTCAATTTGTCATTTACACTCACACTCAGTGCCATTATGTGGTTTGGTTATGGTCTCTTTCTCAAGGACATATGCATTGCTCTCCCAAATGTGTTGGGTTTTGGACTGGGGTTGGTTCAGATGCTGCTCTATGCCATTTATAGGAAGCGCGGTGAAAAGGTTATCACAAAGGGAAAGAAGGCTCCACCTGATGAGCCACTCAAAAGCGTTGTTGTAGATGTGGACAAAAATATTGAACAAGCTAAAGCTAGTGGAAATGGAATGAACAACAACAAAAATGATGAGGAACCTAACACCTGCGCAGTCTGA 804 0.4279 MAISHATLAFTFGMLGNVISFLVFLAPISTFYRIYKKKSTEGFQSLPYLVALFSSMLWLYYALVKKDAMLLITINSFGCVIETIYIILYIIYAPTDARNLTFKLFSAMNVGSFALILLVTHFAVHGPLRVQVLGWICVSISVSVFAAPLSILAQVVRTKSVEFMPFNLSFTLTLSAIMWFGYGLFLKDICIALPNVLGFGLGLVQMLLYAIYRKRGEKVITKGKKAPPDEPLKSVVVDVDKNIEQAKASGNGMNNNKNDEEPNTCAV. 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00037 267 Gene3D - 129 224 - -
Seca2g00037 267 PANTHER RAG1-ACTIVATING PROTEIN 1 14 238 IPR047664 -
Seca2g00037 267 FunFam Bidirectional sugar transporter SWEET 129 221 - -
Seca2g00037 267 MobiDBLite consensus disorder prediction 246 267 - -
Seca2g00037 267 Gene3D - 11 95 - -
Seca2g00037 267 FunFam Bidirectional sugar transporter SWEET 10 98 - -
Seca2g00037 267 MobiDBLite consensus disorder prediction 247 267 - -
Seca2g00037 267 Pfam Sugar efflux transporter for intercellular exchange 11 95 IPR004316 GO:0016020
Seca2g00037 267 Pfam Sugar efflux transporter for intercellular exchange 131 215 IPR004316 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00037 Seca-Chr2 634840 636379 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00037 3 237 Miscellaneous Gene Families AT5G13170 67.797 1.40e-110 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00037 K15382 - gmx:100777741 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00037 2 634840 636379 Seca2g00037 2 634840 636379 ECH