Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00031 ATGAAGCGACAATGTGATGAAAAAAGAGATGTATATGAGTATATGGTGACAAGATATCGAGAAAGAGGTAGGTCTAAAGGTGGAAAAGGGGAAACTTTTTCTTTGCAGCAGTTGCAAACTGCTCGTGATGAATATGATGAAGAGGCTACATTGTTTGTTTTCCGATTGAAATCTCTGAAGCAAGGACAATCACGTAGTCTTCTTACACAGGCAGCACGTCACCATGCTGCTCAGTTATGTTTCTTCAAAAAAGCAGTCAAGTCTCTTGAGACTGTAGAACCACATGTAAAATCAGTAACTGAACAGCAACACATTGATTACCACTTCAGTGGTCTTGAAGAGGAGGATGGGGATGAAGGTGATGATGGAGATGAAGATGATGATGGTTATGATGAGAATGATGATGGAGAACTGAGTTTTGACTATGGACAAATTGAACAAGAGCGAGATGATTCAACGTCACGAAATTCGATGGAGCTGGACCAGGTGGAACTTATGCTTCCTAGAGGCTCAACAGCTGAAGCTGCTAAGGAAAACTTAGATAAGCTTCAAAGGAATTTGTTTTCCTTTAGGGTTAGGACAGGGAGTCAATCTGCCCCACTTTTTGCTGATAATAAACCTGATGCTAGTGAAAAACTGAGACAGATGCGCCCATCTTTATCACGGAAATTCAGTTCTTATGTGCTACCCACACCAGTTGATGCAAAGAGTTCAATCTCTTCAGGGTCAAATAATCCAAAGCCTTCCAAAATGCAGACAAATTTACATGAACCTACAAAGAATTTGTGGCATTCATCCCCATTGGAACAAAAGAAACTTGAAAAAGATATTGGAGATGAGTTTTCTGGTCCTACTGTCAGAAGTGCACAGTCTGTACTCAAGGAAAGTAACAGCAATACTGCCTCCACGAAATTGCCGCCTCCTTTGGTTGATGGTCTTTTATCCTTAAATCATGATTATGTTTCTGCTTACTCTAAAAAGATTAAAAGACATGCCTTTTCTGGTCCATTGACAAGTAATCCTTGGCCTAACAAACCTGTCTCAGTAGAAAGTGTTCAATTGTTCTCTGGACCTCTGCTGCCAACTCCAATCCCACAGCCTCCATCATCATCTCCAAAAGTATCTCCTAGTGCTTCTCCTACTATTGTGTCTTCACCTAAAATAAGTGAGCTTCATGAACTACCGAGGCCTCCAACCCATTTCCAATCCAACTCAAGGTTTTTAGGTTTGGTGGGTCATTCAGGTCCATTGCTGTCCAGAGTTCAAAAGGTTTCTGCCGCAAATAATTTGGTTGTTTCAAGTGCAGCATCTCCACTGCCAACACCACCCCAGGTCATGGCTCGTAGTTTCTCCATACCTTCTAGTGGTGCTAGAGTTGCAGCATTACATGGGTCAAGGACACTAGAATCCTCTCATATATCATCTATATCTGAAGATATTGCTTCTCCCCCTCTGACGCCAATAGCATTATCTAGTAGTCGGCCATCATCAGATGGCTGA 1500 0.4187 MKRQCDEKRDVYEYMVTRYRERGRSKGGKGETFSLQQLQTARDEYDEEATLFVFRLKSLKQGQSRSLLTQAARHHAAQLCFFKKAVKSLETVEPHVKSVTEQQHIDYHFSGLEEEDGDEGDDGDEDDDGYDENDDGELSFDYGQIEQERDDSTSRNSMELDQVELMLPRGSTAEAAKENLDKLQRNLFSFRVRTGSQSAPLFADNKPDASEKLRQMRPSLSRKFSSYVLPTPVDAKSSISSGSNNPKPSKMQTNLHEPTKNLWHSSPLEQKKLEKDIGDEFSGPTVRSAQSVLKESNSNTASTKLPPPLVDGLLSLNHDYVSAYSKKIKRHAFSGPLTSNPWPNKPVSVESVQLFSGPLLPTPIPQPPSSSPKVSPSASPTIVSSPKISELHELPRPPTHFQSNSRFLGLVGHSGPLLSRVQKVSAANNLVVSSAASPLPTPPQVMARSFSIPSSGARVAALHGSRTLESSHISSISEDIASPPLTPIALSSSRPSSDG. 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00031 499 Gene3D Arfaptin homology (AH) domain/BAR domain 1 116 IPR027267 -
Seca2g00031 499 MobiDBLite consensus disorder prediction 198 217 - -
Seca2g00031 499 MobiDBLite consensus disorder prediction 284 304 - -
Seca2g00031 499 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 497 IPR037488 -
Seca2g00031 499 MobiDBLite consensus disorder prediction 472 499 - -
Seca2g00031 499 SUPERFAMILY BAR/IMD domain-like 1 102 IPR027267 -
Seca2g00031 499 MobiDBLite consensus disorder prediction 360 374 - -
Seca2g00031 499 MobiDBLite consensus disorder prediction 112 141 - -
Seca2g00031 499 MobiDBLite consensus disorder prediction 234 266 - -
Seca2g00031 499 CDD BAR 1 95 - -
Seca2g00031 499 MobiDBLite consensus disorder prediction 142 157 - -
Seca2g00031 499 MobiDBLite consensus disorder prediction 103 158 - -
Seca2g00031 499 Coils Coil 173 193 - -
Seca2g00031 499 MobiDBLite consensus disorder prediction 234 304 - -
Seca2g00031 499 MobiDBLite consensus disorder prediction 359 383 - -
Seca2g00031 499 MobiDBLite consensus disorder prediction 267 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00031 Seca-Chr2 576535 581392 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00031 - - gmx:100778278 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00031 2 576535 581392 Seca2g00031 2 576535 581392 ECH