Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00030 ATGGAGGCGAGCACGCTTTTTCATTTTCTTGCCATTTTTCTTCTATTATCATCAGACCCTCTTGCTGTGACATATGCAAACTCTGAAGGTGATGCTCTATACGCCTTCAAAAGAGCTGTGAAAGACCCAAATAACGTTCTACAGAGTTGGGATCCCACTTTGGTGGATCCATGTACATGGTTTCATGTTACCTGTGATGATGAGAAGAGGGTTACCCGATTAGACCTTGGACACGCAAAACTGTCTGGCCGTTTGGTTCCAGAGCTGGGGAGGCTCCAGCGTCTACAATTTCTAGAATTGTACAAGAATGAATTGGTGGGGCCAATACCAAAGGAACTTGGAGACCTCAAGAACCTGGTTAGCTTGGGTCTTTACCACAATAAACTCACTGGCTCCATTCCTTCCACTCTATCTAACCTCTCCAACATCAAATTATTGCGACTCAACGACAACAAACTGACAGGAAGAATACCAAGGGAACTCACTAAACTAGGAAGCCTCAAGATCCTAGATCTATCAAACAATGATCTGTGTGGTACATTCCCCACATCCGGCTCCTTCTCCAAGTTCTCTGAAGAAAGTTTCAAGAACAATTCAAGACTTAAAGGACCAGAATTAATGGGATTTGTCAGATATGATACTGGAGGAAGCTGCAAATGA 660 0.4348 MEASTLFHFLAIFLLLSSDPLAVTYANSEGDALYAFKRAVKDPNNVLQSWDPTLVDPCTWFHVTCDDEKRVTRLDLGHAKLSGRLVPELGRLQRLQFLELYKNELVGPIPKELGDLKNLVSLGLYHNKLTGSIPSTLSNLSNIKLLRLNDNKLTGRIPRELTKLGSLKILDLSNNDLCGTFPTSGSFSKFSEESFKNNSRLKGPELMGFVRYDTGGSCK. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00030 219 Gene3D Ribonuclease Inhibitor 25 208 IPR032675 -
Seca2g00030 219 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 191 - -
Seca2g00030 219 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Seca2g00030 219 SUPERFAMILY L domain-like 27 190 - -
Seca2g00030 219 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Seca2g00030 219 FunFam Somatic embryogenesis receptor kinase 1 25 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00030 Seca-Chr2 573353 576212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00030 1 204 Receptor kinase-like Gene Family AT1G71830 56.863 2.16e-73 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00030 - - gmx:100778819 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00030 2 573353 576212 Seca2g00030 2 573353 576212 ECH