Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00015 ATGGTGAGTTGGTTGCGGCGGGCGGTGGAGGTTTGCTTTGGACGGCGCGATGCTCTCATATGGCACTCCGACTCCGACCACTTCTCCATGGCCGTCACTCAAGTCAACTCCTCCCTCGAGGATCAGAGCCAAGTCTTTGTGTCCCCTTCCACCACTTACGTTGGCGTTTATGACGGCCATGGCGGCCCCGAAGCTTCTAGATTCGTCGCCAAACGTCTCCTTCCTTATTTGCATAACTCGAGAGCAGTCCTTGGCAAGACAAACTCCAAGGCAGAGCTCTTATCAGTGGATCATAATGTCACTGATGAGGAGATCAGGAAAGAGTTCGAAGCTCTTCATCCTCATGATTCACACGTTGTTCTTCATACCCGTGTGTCAAGATCTATTGGTGATGTGTATCTCAAGAGACCTGACTTTTACAGAGACCCGGTTTTTCAGCAATTTGGAAATCCCATTCCTTTGACTCGTCCTGTAATGACAGCTGAACCTTCCATCACTGTTAGGGAGCTTTAA 513 0.4971 MVSWLRRAVEVCFGRRDALIWHSDSDHFSMAVTQVNSSLEDQSQVFVSPSTTYVGVYDGHGGPEASRFVAKRLLPYLHNSRAVLGKTNSKAELLSVDHNVTDEEIRKEFEALHPHDSHVVLHTRVSRSIGDVYLKRPDFYRDPVFQQFGNPIPLTRPVMTAEPSITVREL. 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00015 170 SMART PP2C_4 12 170 IPR001932 -
Seca2g00015 170 PANTHER PROTEIN PHOSPHATASE 79 170 IPR015655 GO:0004722|GO:0006470
Seca2g00015 170 ProSitePatterns PPM-type phosphatase domain signature. 53 61 IPR000222 GO:0043169
Seca2g00015 170 Gene3D - 80 170 IPR036457 -
Seca2g00015 170 Gene3D - 15 79 IPR036457 -
Seca2g00015 170 Pfam Protein phosphatase 2C 80 169 IPR001932 -
Seca2g00015 170 SUPERFAMILY PP2C-like 32 170 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00015 Seca-Chr2 346427 347327 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00015 77 170 PP2C-type Phosphatase Gene Family AT4G33920 58.929 4.29e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00015 - K01102 vvi:100254953 193.356