Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06985 ATGCCATTTTCTTCAACCGCGTTTGCGTTACCGACGGTTCAGATCGATCAGCAAGCGGCAGAATCGCTTCGTAAGAACGAGAGGCTTGGATCTGATGAACCCAGCATTGATGATGCTCCTGCGAAATCAGGGAGCGGTGTGTCTCTGAAGGATCAATTGAAGAAGAAACCTCTGGAAAACAATAACTATCATGGAAAACTGCGTAGTGATCCTAATTTTAGCATGCTCAAAACTACAGCAGCAACTGCACCCAAACTTTCTCCCAAATCTAGCCCTACCCTCACAGATGGTGATTGGACTGAACTCCTTAGTTCACCTAGTCAGTCTATAGCTTCTTCTTCTGGCGGGAATCATGGTAACGGGGTGCCTGTAGCTCGTAGTTTGAGCAAAAATAATAGGAAGCTGAAGAGTTTACCGGTGTCAGATGTAAAGAGGAATAAAAAAAATAGTAACAGTGGTTCAAGGTCTTTGCAGAAGTTAGACTCTCTCAAAGAAATTAAATTGAGTGGAAAAACTAGTGATGATGGGAAGGACTCTACCTCTTCGGGTTCGACTGAGAGGAATTTGAATGTAGAATCGGAGACTGATGGTAAATTGACTAGAGGACAGGAATATGCTAGCAAGGACAGTTCTGTGAAGCCTGTGGTTGAGACAAGTGATAAGGCAAATGAAGAACATGAGCATCATTTTAATTATAGGGACCTTTCTCCACCAGAGTCTTTGCAGGAAGATAAGAAAACTTTGGCTGCAGAAACAATACCAGTATCAGGGGTTGATGAGGTGCAAGAAGCAAAGGTCACAGTAGATGCTGTTGGTGGTCAATTTAGAAGTGCAATAAAAGGGAGGCATGAGCGTAATTCAGTCTCTGGAAATTTAACATCTGATGATTTTAAAAGGGGTTCTTCCATTGCAAGTGATGGAAGTTCTGATTCAGAGACAGATTCTGGTTCAACCTCTGATTCTGAAAGTGAACGAGAGAGAGAGGAAAGGAGAAAGAAGAGGGAACGGATCCTGGCTGAGAAAGCAGCAGCTAAAGCAATAAATGTTATCAAGGAAAAGGAGAATATGGTGGCCAAATTAGAGGGGGAGAAGCAAAGTCTAGAGAAAATACTTGAGGAGCGAGCTAAAAAACAAGCACAAGAGGCTTCACAGCTTCAGAGCACCATGATGGAAACAATGGAAGCTGTTGAGTTAGAAAAGCAAAAACATAACAATACTAGAATGGAAGTTCTTACACGTTTGGCTAAACTGGAGACTGCTAATGCTGATCTTGCAAGATCCCTTGCAGCTGTGCAGTGGAACCTCGAAGTTGAGGTTAAACAAGTAGCAGAACTCAGACAGAAAATTGTATCTAAAGAGTTTGTTCATGAAGGTACTGCCCCTTTATACAGTCATTGA 1398 0.4242 MPFSSTAFALPTVQIDQQAAESLRKNERLGSDEPSIDDAPAKSGSGVSLKDQLKKKPLENNNYHGKLRSDPNFSMLKTTAATAPKLSPKSSPTLTDGDWTELLSSPSQSIASSSGGNHGNGVPVARSLSKNNRKLKSLPVSDVKRNKKNSNSGSRSLQKLDSLKEIKLSGKTSDDGKDSTSSGSTERNLNVESETDGKLTRGQEYASKDSSVKPVVETSDKANEEHEHHFNYRDLSPPESLQEDKKTLAAETIPVSGVDEVQEAKVTVDAVGGQFRSAIKGRHERNSVSGNLTSDDFKRGSSIASDGSSDSETDSGSTSDSESEREREERRKKRERILAEKAAAKAINVIKEKENMVAKLEGEKQSLEKILEERAKKQAQEASQLQSTMMETMEAVELEKQKHNNTRMEVLTRLAKLETANADLARSLAAVQWNLEVEVKQVAELRQKIVSKEFVHEGTAPLYSH. 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06985 465 MobiDBLite consensus disorder prediction 284 316 - -
Seca12g06985 465 MobiDBLite consensus disorder prediction 19 248 - -
Seca12g06985 465 MobiDBLite consensus disorder prediction 214 246 - -
Seca12g06985 465 MobiDBLite consensus disorder prediction 160 174 - -
Seca12g06985 465 PANTHER GOLGIN-84 14 457 IPR019177 GO:0007030
Seca12g06985 465 MobiDBLite consensus disorder prediction 318 336 - -
Seca12g06985 465 MobiDBLite consensus disorder prediction 144 159 - -
Seca12g06985 465 MobiDBLite consensus disorder prediction 21 35 - -
Seca12g06985 465 MobiDBLite consensus disorder prediction 274 336 - -
Seca12g06985 465 MobiDBLite consensus disorder prediction 65 136 - -
Seca12g06985 465 Coils Coil 325 388 - -
Seca12g06985 465 MobiDBLite consensus disorder prediction 175 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06985 Seca-Chr12 161825047 161828266 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06985 - - gmx:100803473 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06985 12 161825047 161828266 Seca12g06985 12 161825047 161828266 ECH