Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06981 ATGGGTACTGTCATTGACTCCCATTTCTTAGCCCTCACTGCCTTGGTCACTATTGCCTATCAGTTTCTGTTTTTCGTCATCACTGCACTCCTCAAATTCGACAAGGTCACTGATTTTGCTGGAAGTACAAATTTCGTTATTCTTGCTATATTGACCCTGTTGCTCAAAGGCTCCTGGCATTTTCGACAGATAATCCTGACTCTGTTTGTTGTACTATGGGGTCTTCGCCTGGGTCTTTTTCTCTTAATCAGGATTTTACAGTGGGGAGAGGATCGACGCTTTGATGAAATGCGCAATAATTTGGGTAGATTGGCCATATTTTGGATATTTCAGGCTGTCTGGGTGTGGGCCGTGAGTTTACCTGTTACAGTGGTTAATGCAAGTGACAGAAATCCTTTTATACAGGTTGAGGATATAATAGGGTGGATTTTGTGGTTTGTGGGTTTCATTGTTGAAGGTACAGCAGATCAACAAAAGTTGCGTTTCAAACAGTCCTCAGAAAATAGAGGGAGGTGGTGCAATGTGGGACTCTGGAAATATTCTCGTCATCCTAACTATTTTGGTGAGATATTGCTTTGGTGGGGAATTTTTGTGGCATCTACACCTGTATTGAGGGATGCTGAATGGCTAGTAATCATTGGACCAATCTTTCTCACATTATTGCTGCTTTTTGTCAGTGGTATTCCACTACTTGAGGATTCAGCAGATAAGAAGTTTGGCAATGTGGATGGATATAGGACATACAAAAAAAGAACCAGGTCATTTTCCTCCTCCATGTTATTATTTATTTTCAATTATCATTAA 804 0.4067 MGTVIDSHFLALTALVTIAYQFLFFVITALLKFDKVTDFAGSTNFVILAILTLLLKGSWHFRQIILTLFVVLWGLRLGLFLLIRILQWGEDRRFDEMRNNLGRLAIFWIFQAVWVWAVSLPVTVVNASDRNPFIQVEDIIGWILWFVGFIVEGTADQQKLRFKQSSENRGRWCNVGLWKYSRHPNYFGEILLWWGIFVASTPVLRDAEWLVIIGPIFLTLLLLFVSGIPLLEDSADKKFGNVDGYRTYKKRTRSFSSSMLLFIFNYH. 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06981 267 Gene3D - 58 256 - -
Seca12g06981 267 ProSiteProfiles Steroid 5-alpha reductase C-terminal domain profile. 141 209 IPR001104 GO:0006629|GO:0016627
Seca12g06981 267 Pfam Protein of unknown function (DUF1295) 24 252 IPR010721 -
Seca12g06981 267 PANTHER 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE 5 255 IPR010721 -
Seca12g06981 267 FunFam 3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295) 59 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06981 Seca-Chr12 161812879 161817586 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06981 - - gmx:100780288 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06981 12 161812879 161817586 Seca12g06981 12 161812879 161817586 ECH