Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06972 ATGCCTTCTTCTTTGTCTCCCAACACCTCCTCCTCTGTTCTGATTTTGTGCATTGCCTTTCTGATCATGGCTGCCTCTGTTGATCCTTTGGTTGTTGGTCGCGTCATCGGAGACGTTGTTGACATGTTCGTTCCAACTGTGAGCATGTCTGTCTACTTCGACTCCAAGCATGTCACCAATGGCTGTGAAATCAAGCCATCCATCGCGGTTAACGCGCCCAAAGTTACCCTTACTGGTAACATGGACACTCTCTACACTCTGGTAGTCATGACAGATCCAGATGCACCAAGCCCCAGTGAGCCAAGCATGCGCGAGTGGATACATTGGATCGTTGTTGACATTCCTGGAGGGACCAACCCAAAAAGGGGTAAAGAGGTTCTTGCTTATGTGGGGCCAAGGCCACCGGTGGGGATCCACCGTTACATACTGGTGCTATTTGAGCAGAAAGGACCACTGGGACTGGTGGAGCAGCCACCGAGTAGGGCGAGTTTCAACACTCGCTATTTTGCCAGGCAGTTGGACTTAGGGCTCCCAGTTGCAACCGTTTACTTCAACGCTCAGAAGGAGCCTGCCGCTAGGAGGCGCGCATAA 591 0.5195 MPSSLSPNTSSSVLILCIAFLIMAASVDPLVVGRVIGDVVDMFVPTVSMSVYFDSKHVTNGCEIKPSIAVNAPKVTLTGNMDTLYTLVVMTDPDAPSPSEPSMREWIHWIVVDIPGGTNPKRGKEVLAYVGPRPPVGIHRYILVLFEQKGPLGLVEQPPSRASFNTRYFARQLDLGLPVATVYFNAQKEPAARRRA. 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06972 196 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 33 189 IPR035810 -
Seca12g06972 196 Gene3D - 22 195 IPR036610 -
Seca12g06972 196 CDD PEBP_euk 47 186 IPR035810 -
Seca12g06972 196 Pfam Phosphatidylethanolamine-binding protein 71 183 IPR008914 -
Seca12g06972 196 SUPERFAMILY PEBP-like 20 188 IPR036610 -
Seca12g06972 196 FunFam Terminal flower 1 23 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06972 Seca-Chr12 161739744 161741946 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06972 - - gmx:100306314 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06972 12 161739744 161741946 Seca12g06972 12 161739744 161741946 ECH