Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06967 ATGCTTTCTGTGAGGGATTTGTGGAGGCGGCATAGGAGGAAGATTTTCCTTTCTGTTGGTGTTTTTGGAGGTGGGTATTTTTTGTATAAGCTTTATGGTTCTCACAGGCAAAGGCTCCAAGCACTTGAGAGGGAACTCGAAGTTCAGAGGGAAAGTGAGGAGTTTATAAAGGCTCAGATGCAAGCTCACTTTGAGAATATTCAGAGAATTTCTGATACAATAACATTGCCTCATGCTATGCACAATTTAAGTTGTCGGATAGCAGAAGAGTTGGATCTTTCTCACCTTCTTGAGAGGCTAATCCAAGGAAAGGGTCAGCCGAACACTTTAACACAATCAGAGAAGCTAGAATTATGGGGTAGACTCAAAATTCTAAGTTTTACAAGAATGGCATTGTCAATATGGGCAACAATAATGCTTAGCTTATATACAAAAGTGCAAGTCAATATACTAGGAAGGCATCTATACATTGATACTGCACGAAGTCTTGGAAGCTCTAATTCAATGGTAAGAACAACTGTTTTTCTCATTATTGATCATTCAATGTGA 549 0.3898 MLSVRDLWRRHRRKIFLSVGVFGGGYFLYKLYGSHRQRLQALERELEVQRESEEFIKAQMQAHFENIQRISDTITLPHAMHNLSCRIAEELDLSHLLERLIQGKGQPNTLTQSEKLELWGRLKILSFTRMALSIWATIMLSLYTKVQVNILGRHLYIDTARSLGSSNSMVRTTVFLIIDHSM. 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06967 182 PANTHER PEROXISOMAL BIOGENESIS FACTOR 3 1 168 IPR006966 GO:0005778|GO:0007031
Seca12g06967 182 Pfam Peroxin-3 107 168 IPR006966 GO:0005778|GO:0007031
Seca12g06967 182 Coils Coil 32 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06967 Seca-Chr12 161669015 161670466 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06967 K13336 - gmx:100782816 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06967 12 161669015 161670466 Seca12g06967 12 161669015 161670466 ECH